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Report for CCDS43537.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43537.1 Public Homo sapiens 7 TMEM184A 24 110 108 CCDS HistoryNCBI Gene:202915Re-query CCDS DB by CCDS ID:43537.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43537.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297477.10 ENSP00000297477.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297477.10Link to Ensembl Protein Viewer:ENSP00000297477.4Re-query CCDS DB by Nucleotide ID:ENST00000297477Re-query CCDS DB by Protein ID:ENSP00000297477
Original member Current member NCBI NM_001097620.2 NP_001091089.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001097620.2Link to Protein Sequence:NP_001091089.1Re-query CCDS DB by Nucleotide ID:NM_001097620Re-query CCDS DB by Protein ID:NP_001091089Link to BLAST:NP_001091089.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091089.1 413 Q6ZMB5 413 100% 0 0

Chromosomal Locations for CCDS 43537.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 1546952 1547181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1547742 1547939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1548519 1548688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1549854 1549945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1550123 1550198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1550305 1550395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1550817 1550982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1555266 1555484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGAGTAATGTCTCAGGGATCCTGGAGACAGCCGGCGTCCCCCTGGTGTCAGCGAACTGGCCGCAGCCCA
GCCCCCCACCGGCTGTGCCAGCTGGGCCGCAGATGGACCACATGGGGAACAGCTCCCAGGGGGCCCCCTG
GCTCTTCCTCACCTCCGCACTGGCCCGAGGCGTCTCGGGGATCTTCGTGTGGACTGCCCTGGTGCTCACC
TGCCACCAGATCTATCTGCACCTGCGCTCCTACACCGTGCCACAGGAGCAACGTTACATCATCCGCCTGC
TCCTCATCGTGCCCATCTACGCCTTCGACTCCTGGCTCAGCCTCCTCCTCCTCGGAGACCACCAGTACTA
CGTCTACTTCGACTCTGTGCGGGACTGCTACGAAGCCTTTGTCATTTACAGCTTCCTGAGCCTGTGTTTC
CAGTACCTGGGAGGCGAGGGCGCCATCATGGCTGAGATTCGTGGAAAGCCCATCAAGTCCAGCTGCTTGT
ACGGCACCTGCTGCCTCCGGGGCATGACCTACTCCATCGGGTTCCTGCGCTTCTGTAAGCAGGCCACTCT
GCAGTTCTGCCTGGTGAAGCCCGTCATGGCCGTCACCACCATCATCCTCCAGGCATTTGGCAAATACCAC
GACGGGGACTTCAATGTCCGCAGCGGCTACCTCTATGTGACCCTCATCTACAACGCCTCCGTCAGCCTCG
CCCTCTACGCCCTGTTCCTCTTCTACTTCACCACCAGGGAGCTCCTGCGGCCCTTCCAGCCCGTCCTCAA
GTTCCTCACCATCAAAGCCGTCATCTTCCTGTCGTTCTGGCAAGGGCTGCTGCTGGCCATCCTGGAGCGG
TGCGGGGTCATCCCGGAGGTGGAGACCAGCGGCGGGAACAAGCTGGGGGCTGGCACGCTGGCCGCCGGCT
ACCAGAACTTCATCATCTGCGTGGAGATGCTGTTCGCCTCCGTGGCCCTGCGTTATGCCTTCCCCTGCCA
GGTGTACGCAGAGAAGAAGGAGAATTCACCAGCCCCCCCGGCACCCATGCAGAGCATCTCCAGCGGCATC
AGGGAGACAGTGAGCCCCCAGGACATCGTGCAGGACGCCATCCACAACTTCTCCCCCGCCTACCAGCACT
ACACGCAGCAGGCCACGCACGAGGCGCCCAGGCCCGGCACCCACCCCAGCGGCGGCTCCGGCGGGAGCAG
GAAGAGCCGGAGCCTGGAGAAGCGGATGCTGATCCCCTCGGAGGACCTGTAG

Translation (413 aa):
MSNVSGILETAGVPLVSANWPQPSPPPAVPAGPQMDHMGNSSQGAPWLFLTSALARGVSGIFVWTALVLT
CHQIYLHLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLLLLGDHQYYVYFDSVRDCYEAFVIYSFLSLCF
QYLGGEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAVTTIILQAFGKYH
DGDFNVRSGYLYVTLIYNASVSLALYALFLFYFTTRELLRPFQPVLKFLTIKAVIFLSFWQGLLLAILER
CGVIPEVETSGGNKLGAGTLAAGYQNFIICVEMLFASVALRYAFPCQVYAEKKENSPAPPAPMQSISSGI
RETVSPQDIVQDAIHNFSPAYQHYTQQATHEAPRPGTHPSGGSGGSRKSRSLEKRMLIPSEDL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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