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Report for CCDS2064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2064.1 Public Homo sapiens 2 TMEM182 24 110 108 CCDS HistoryNCBI Gene:130827Re-query CCDS DB by CCDS ID:2064.1Re-query CCDS DB by GeneID:130827See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2064.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000412401.3 ENSP00000394178.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000412401.3Link to Ensembl Protein Viewer:ENSP00000394178.2Re-query CCDS DB by Nucleotide ID:ENST00000412401Re-query CCDS DB by Protein ID:ENSP00000394178
Original member Current member NCBI NM_144632.5 NP_653233.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144632.5Link to Protein Sequence:NP_653233.5Re-query CCDS DB by Nucleotide ID:NM_144632Re-query CCDS DB by Protein ID:NP_653233Link to BLAST:NP_653233.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653233.5 229 Q6ZP80-1 229 100% 0 0

Chromosomal Locations for CCDS 2064.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 102762218 102762349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 102762587 102762686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 102764329 102764427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 102797863 102798000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 102814748 102814968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGAGACTAAATATCGCTATCTTCTTTGGAGCTCTCTTTGGTGCTTTGGGGGTGTTACTCTTTTTGGTGG
CTTTTGGATCGGATTATTGGCTTCTTGCAACTGAAGTGGGGAGATGTTCAGGTGAAAAGAATATAGAGAA
CGTCACTTTTCACCATGAAGGGTTCTTCTGGAGGTGTTGGTTTAATGGGATTGTGGAAGAGAATGACTCC
AATATTTGGAAGTTCTGGTACACCAATCAGCCACCGTCCAAGAACTGCACACATGCTTACCTGTCTCCGT
ACCCCTTCATGAGAGGCGAGCACAACTCGACCTCCTATGACTCTGCAGTTATTTACCGTGGTTTCTGGGC
AGTCCTGATGCTCCTGGGGGTAGTTGCTGTAGTCATCGCAAGCTTTTTGATCATCTGTGCAGCCCCCTTC
GCCAGCCATTTTCTCTACAAAGCTGGGGGAGGCTCATATATTGCTGCAGGCATCCTATTTTCATTGGTGG
TGATGCTGTATGTCATCTGGGTCCAGGCAGTGGCTGACATGGAAAGCTACCGAAACATGAAAATGAAGGA
CTGCCTGGATTTCACCCCTTCTGTTCTGTATGGCTGGTCATTTTTCCTGGCCCCAGCTGGGATATTTTTT
TCTTTGCTAGCTGGATTACTATTTCTGGTTGTTGGATGGCATATTCAGATACATCACTAA

Translation (229 aa):
MRLNIAIFFGALFGALGVLLFLVAFGSDYWLLATEVGRCSGEKNIENVTFHHEGFFWRCWFNGIVEENDS
NIWKFWYTNQPPSKNCTHAYLSPYPFMRGEHNSTSYDSAVIYRGFWAVLMLLGVVAVVIASFLIICAAPF
ASHFLYKAGGGSYIAAGILFSLVVMLYVIWVQAVADMESYRNMKMKDCLDFTPSVLYGWSFFLAPAGIFF
SLLAGLLFLVVGWHIQIHH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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