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Report for CCDS31596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31596.1 Public Homo sapiens 11 PPP1R14B 24 110 108 CCDS HistoryNCBI Gene:26472Re-query CCDS DB by CCDS ID:31596.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31596.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309318.8 ENSP00000310117.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309318.8Link to Ensembl Protein Viewer:ENSP00000310117.3Re-query CCDS DB by Nucleotide ID:ENST00000309318Re-query CCDS DB by Protein ID:ENSP00000310117
Original member Current member NCBI NM_138689.3 NP_619634.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138689.3Link to Protein Sequence:NP_619634.1Re-query CCDS DB by Nucleotide ID:NM_138689Re-query CCDS DB by Protein ID:NP_619634Link to BLAST:NP_619634.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_619634.1 147 Q96C90 147 100% 0 0

Chromosomal Locations for CCDS 31596.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64244754 64244822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64244930 64244962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64245204 64245287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64246416 64246673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGCGGACAGCGGCACCGCGGGGGGCGCGGCGTTGGCGGCCCCGGCCCCCGGGCCGGGCAGTGGCGGCC
CAGGACCACGCGTCTACTTTCAGAGCCCCCCCGGGGCCGCAGGAGAGGGCCCGGGCGGGGCGGACGATGA
GGGCCCAGTGAGGCGCCAAGGGAAGGTCACCGTCAAGTATGACCGCAAGGAGCTACGGAAGCGCCTCAAC
CTAGAGGAGTGGATCCTGGAGCAGCTCACGCGCCTCTACGACTGCCAGGAAGAGGAGATCCCAGAACTGG
AGATTGACGTGGATGAGCTCCTGGACATGGAGAGTGACGATGCCCGGGCTGCCAGGGTCAAGGAGCTGCT
GGTTGACTGTTACAAACCCACAGAGGCCTTCATTTCTGGCCTGCTGGACAAGATCCGGGGCATGCAGAAG
CTGAGCACACCCCAGAAGAAGTGA

Translation (147 aa):
MADSGTAGGAALAAPAPGPGSGGPGPRVYFQSPPGAAGEGPGGADDEGPVRRQGKVTVKYDRKELRKRLN
LEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDARAARVKELLVDCYKPTEAFISGLLDKIRGMQK
LSTPQKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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