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Report for CCDS1344.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1344.1 Public Homo sapiens 1 GLUL 24 110 108 CCDS HistoryNCBI Gene:2752Re-query CCDS DB by CCDS ID:1344.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1344.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311223.9 ENSP00000307900.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000311223.9Link to Ensembl Protein Viewer:ENSP00000307900.5Re-query CCDS DB by Nucleotide ID:ENST00000311223Re-query CCDS DB by Protein ID:ENSP00000307900
Original member Current member EBI ENST00000339526.8 ENSP00000344958.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339526.8Link to Ensembl Protein Viewer:ENSP00000344958.4Re-query CCDS DB by Nucleotide ID:ENST00000339526Re-query CCDS DB by Protein ID:ENSP00000344958
Original member Current member EBI ENST00000331872.11 ENSP00000356537.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331872.11Link to Ensembl Protein Viewer:ENSP00000356537.6Re-query CCDS DB by Nucleotide ID:ENST00000331872Re-query CCDS DB by Protein ID:ENSP00000356537
Original member Current member EBI ENST00000417584.6 ENSP00000398320.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417584.6Link to Ensembl Protein Viewer:ENSP00000398320.2Re-query CCDS DB by Nucleotide ID:ENST00000417584Re-query CCDS DB by Protein ID:ENSP00000398320
Original member Current member NCBI NM_001033044.4 NP_001028216.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001033044.4Link to Protein Sequence:NP_001028216.1Re-query CCDS DB by Nucleotide ID:NM_001033044Re-query CCDS DB by Protein ID:NP_001028216Link to BLAST:NP_001028216.1
Original member Current member NCBI NM_001033056.4 NP_001028228.1 Accepted alive Link to Nucleotide Sequence:NM_001033056.4Link to Protein Sequence:NP_001028228.1Re-query CCDS DB by Nucleotide ID:NM_001033056Re-query CCDS DB by Protein ID:NP_001028228Link to BLAST:NP_001028228.1
Original member Current member NCBI NM_002065.7 NP_002056.2 Accepted alive Link to Nucleotide Sequence:NM_002065.7Link to Protein Sequence:NP_002056.2Re-query CCDS DB by Nucleotide ID:NM_002065Re-query CCDS DB by Protein ID:NP_002056Link to BLAST:NP_002056.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028216.1 373 P15104 373 100% 0 0
NP_001028228.1 373 P15104 373 100% 0 0
NP_002056.2 373 P15104 373 100% 0 0

Chromosomal Locations for CCDS 1344.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 182384405 182384723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182385357 182385556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182385760 182385887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182386256 182386402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182387131 182387292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182388572 182388737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGACCACCTCAGCAAGTTCCCACTTAAATAAAGGCATCAAGCAGGTGTACATGTCCCTGCCTCAGGGTG
AGAAAGTCCAGGCCATGTATATCTGGATCGATGGTACTGGAGAAGGACTGCGCTGCAAGACCCGGACCCT
GGACAGTGAGCCCAAGTGTGTGGAAGAGTTGCCTGAGTGGAATTTCGATGGCTCTAGTACTTTACAGTCT
GAGGGTTCCAACAGTGACATGTATCTCGTGCCTGCTGCCATGTTTCGGGACCCCTTCCGTAAGGACCCTA
ACAAGCTGGTGTTATGTGAAGTTTTCAAGTACAATCGAAGGCCTGCAGAGACCAATTTGAGGCACACCTG
TAAACGGATAATGGACATGGTGAGCAACCAGCACCCCTGGTTTGGCATGGAGCAGGAGTATACCCTCATG
GGGACAGATGGGCACCCCTTTGGTTGGCCTTCCAACGGCTTCCCAGGGCCCCAGGGTCCATATTACTGTG
GTGTGGGAGCAGACAGAGCCTATGGCAGGGACATCGTGGAGGCCCATTACCGGGCCTGCTTGTATGCTGG
AGTCAAGATTGCGGGGACTAATGCCGAGGTCATGCCTGCCCAGTGGGAATTTCAGATTGGACCTTGTGAA
GGAATCAGCATGGGAGATCATCTCTGGGTGGCCCGTTTCATCTTGCATCGTGTGTGTGAAGACTTTGGAG
TGATAGCAACCTTTGATCCTAAGCCCATTCCTGGGAACTGGAATGGTGCAGGCTGCCATACCAACTTCAG
CACCAAGGCCATGCGGGAGGAGAATGGTCTGAAGTACATCGAGGAGGCCATTGAGAAACTAAGCAAGCGG
CACCAGTACCACATCCGTGCCTATGATCCCAAGGGAGGCCTGGACAATGCCCGACGTCTAACTGGATTCC
ATGAAACCTCCAACATCAACGACTTTTCTGCTGGTGTAGCCAATCGTAGCGCCAGCATACGCATTCCCCG
GACTGTTGGCCAGGAGAAGAAGGGTTACTTTGAAGATCGTCGCCCCTCTGCCAACTGCGACCCCTTTTCG
GTGACAGAAGCCCTCATCCGCACGTGTCTTCTCAATGAAACCGGCGATGAGCCCTTCCAGTACAAAAATT
AA

Translation (373 aa):
MTTSASSHLNKGIKQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQS
EGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLM
GTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCE
GISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKR
HQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFS
VTEALIRTCLLNETGDEPFQYKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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