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Report for CCDS10032.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10032.1 Public Homo sapiens 15 EMC7 24 110 108 CCDS HistoryNCBI Gene:56851Re-query CCDS DB by CCDS ID:10032.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10032.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256545.9 ENSP00000256545.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256545.9Link to Ensembl Protein Viewer:ENSP00000256545.4Re-query CCDS DB by Nucleotide ID:ENST00000256545Re-query CCDS DB by Protein ID:ENSP00000256545
Original member Current member NCBI NM_020154.3 NP_064539.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020154.3Link to Protein Sequence:NP_064539.1Re-query CCDS DB by Nucleotide ID:NM_020154Re-query CCDS DB by Protein ID:NP_064539Link to BLAST:NP_064539.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064539.1 242 Q9NPA0 242 100% 0 0

Chromosomal Locations for CCDS 10032.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34084334 34084486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34088053 34088133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34090317 34090455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34095895 34096014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34101604 34101839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGGCGGCCGCTCTGTGGGGCTTCTTTCCCGTCCTGCTGCTGCTGCTGCTATCGGGGGATGTCCAGAGCT
CGGAGGTGCCCGGGGCTGCTGCTGAGGGATCGGGAGGGAGTGGGGTCGGCATAGGAGATCGCTTCAAGAT
TGAGGGGCGTGCAGTTGTTCCAGGGGTGAAGCCTCAGGACTGGATCTCGGCGGCCCGAGTGCTGGTAGAC
GGAGAAGAGCACGTCGGTTTCCTTAAGACAGATGGGAGTTTTGTGGTTCATGATATACCTTCTGGATCTT
ATGTAGTGGAAGTTGTATCTCCAGCTTACAGATTTGATCCCGTTCGAGTGGATATCACTTCGAAAGGAAA
AATGAGAGCAAGATATGTGAATTACATCAAAACATCAGAGGTTGTCAGACTGCCCTATCCTCTCCAAATG
AAATCTTCAGGTCCACCTTCTTACTTTATTAAAAGGGAATCGTGGGGCTGGACAGACTTTCTAATGAACC
CAATGGTTATGATGATGGTTCTTCCTTTATTGATATTTGTGCTTCTGCCTAAAGTGGTCAACACAAGTGA
TCCTGACATGAGACGGGAAATGGAGCAGTCAATGAATATGCTGAATTCCAACCATGAGTTGCCTGATGTT
TCTGAGTTCATGACAAGACTCTTCTCTTCAAAATCATCTGGCAAATCTAGCAGCGGCAGCAGTAAAACAG
GCAAAAGTGGGGCTGGCAAAAGGAGGTAG

Translation (242 aa):
MAAALWGFFPVLLLLLLSGDVQSSEVPGAAAEGSGGSGVGIGDRFKIEGRAVVPGVKPQDWISAARVLVD
GEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRFDPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQM
KSSGPPSYFIKRESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNMLNSNHELPDV
SEFMTRLFSSKSSGKSSSGSSKTGKSGAGKRR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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