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Report for CCDS27122.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
27122.1 |
Public |
Mus musculus |
14 |
Tm9sf1 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 27122.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000002391.14 |
ENSMUSP00000002391.8 |
Accepted |
alive |
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EBI |
ENSMUST00000121791.7 |
ENSMUSP00000112764.1 |
Accepted |
alive |
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EBI |
ENSMUST00000120041.7 |
ENSMUSP00000112893.1 |
Accepted |
alive |
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EBI |
ENSMUST00000122358.7 |
ENSMUSP00000113782.1 |
Accepted |
alive |
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NCBI |
NM_001360063.1 |
NP_001346992.1 |
Accepted |
alive |
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NCBI |
NM_028780.3 |
NP_083056.2 |
Accepted |
alive |
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Chromosomal Locations for CCDS 27122.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1821 nt): ATGACAGTCCTAGGGTACCCTCGAAGTTGGAGCTGCCATTGTTTGCCAGTCCTGATACTGTTGCTGGGCA TAGGCCATGGGCCATGGGTGGAAGGTGTCACACACTACAAGCCCGGCGACCCTGTCATTCTATATGTCAA CAAAGTGGGACCCTACCATAACCCTCAGGAAACTTACCACTACTATCAGCTTCCAGTCTGCTGTCCTGAG AAGATCCGCCACAAAAGTCTTAGTTTGGGTGAAGTTCTGGATGGGGACCGAATGGCCGAATCTTTGTACG AGATCCGCTTTCGGGAGAATGTGGAGAAGAGAATTCTGTGTCACATGCAGCTCAGTTCTGCACAGGTGGA GCAGCTGCGCCAGGCCATTGAGGAATTGTATTACTTTGAGTTTGTGGTCGATGATTTGCCAATCCGTGGT TTTGTGGGCTACATGGAAGAGAGTGGCTTCCTGCCACATAGCCACAAGATAGGCCTCTGGACACATTTGG ACTTCCACCTAGAATTCCATGGAGATCGAATTATATTTGCCAATGTTTCGGTGCGGGACGTCAAGCCCCA CAGCTTGGATGGGCTGCGGTCTGATGAATTGCTGGGCCTTACTCACACTTACAGTGTGCGCTGGTCTGAG ACGTCAGTGGAGCATCGGAGTGACAGGCGCCGAGGTGATGATGGAGGCTTCTTTCCTCGAACCCTGGAAA TCCATTGGTTGTCCATCATCAACTCCATGGTGCTTGTGTTTTTACTGGTGGGTTTTGTGGCTGTTATTCT AATGCGTGTGCTTCGAAATGACCTGGCTCGGTACAACCTAGACGAAGAGACGAGCTCTGGCGGCTCTAGT GACGACTTTGACCAGGGCGATAATGGCTGGAAAATTATCCATACAGATGTCTTCCGCTTCCCTCCATACC GTGGTCTGCTCTGTGCTGTGCTTGGTGTGGGCGCCCAGTTCCTGGCCCTTGGCACTGGCATTATTGTCAT GGCGTTGCTTGGCATGTTCAACGTGCACCGTCACGGGGCCATTAACTCAGCAGCGATCTTGTTGTATGCC CTGACCTGCTGCATCTCTGGCTACGTGTCGAGCCACTTCTACCGGCAAATTGGAGGCGAGCGTTGGGTGT GGAACATCATTCTCACCAGCAGCCTCTTCTCTGTGCCTTTCTTCCTGACTTGGAGTGTGGTGAACTCAGT GCATTGGGCCAACGGTTCAACACAGGCGCTGCCGGCCACAACCATCCTGCTGCTGCTGACAGTCTGGCTG CTGGTAGGCTTTCCTCTCACTGTCATTGGCGGCATCTTTGGGAAGAACAACGCTAGTCCCTTTGATGCAC CTTGTCGCACAAAGAATATCGCCCGGGAGATCCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACAT GACTGTTGGTGGCTTCCTGCCTTTCAGCGCCATCTCCGTGGAGCTGTACTACATCTTTGCCACAGTCTGG GGTCGAGAGCAGTACACTCTGTACGGCATCCTCTTCTTTGTCTTCGCCATCCTGCTGAGTGTGGGGGCCT GCATCTCCATTGCGCTCACCTACTTCCAGCTGTCTGGGGAAGACTACCGCTGGTGGTGGCGATCCGTGCT GAGCGTCGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAGTTTTCTACTATGCCCGGCGCTCTAACATG TCAGGGGCAGTACAGACAGTAGAGTTCTTTGGCTACTCTTTACTGACTGGCTATGTCTTCTTCCTCATGC TGGGTACCATCTCCTTTTTTTCCTCTTTAAAGTTCATCCGTTATATCTATGTTAACCTCAAGATGGACTG A
Translation (606 aa): MTVLGYPRSWSCHCLPVLILLLGIGHGPWVEGVTHYKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPE KIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRG FVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSE TSVEHRSDRRRGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSS DDFDQGDNGWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYA LTCCISGYVSSHFYRQIGGERWVWNIILTSSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWL LVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVW GREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNM SGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD
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