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Report for CCDS84992.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84992.1 Public Mus musculus 5 Grid2ip 23 108 98 CCDS HistoryNCBI Gene:170935Re-query CCDS DB by CCDS ID:84992.1Re-query CCDS DB by GeneID:170935See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84992.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120825.1 ENSMUSP00000113443.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120825.1Link to Ensembl Protein Viewer:ENSMUSP00000113443.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120825Re-query CCDS DB by Protein ID:ENSMUSP00000113443
Original member Current member NCBI NM_001347529.2 NP_001334458.1 Accepted alive Link to Nucleotide Sequence:NM_001347529.2Link to Protein Sequence:NP_001334458.1Re-query CCDS DB by Nucleotide ID:NM_001347529Re-query CCDS DB by Protein ID:NP_001334458Link to BLAST:NP_001334458.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334458.1 1031 Q0QWG9-3 1031 100% 0 0

Chromosomal Locations for CCDS 84992.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 143370177 143370211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143372994 143373242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143373431 143373516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143374400 143374469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143375252 143375346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143375550 143375733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143377489 143377643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143379252 143379392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143380100 143380197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143380386 143380503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143381583 143381938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143382514 143382930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143386007 143386094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143386721 143386798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143387318 143387514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143387822 143387977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143388109 143388195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143388649 143388778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143388867 143388985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143391041 143391205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143391397 143391468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3096 nt):
ATGGGGAAGGACCAGGGCTTCTCTCGGCACTTTAGGATCTTTATTCCCAAAAAGCATCGGGCGCGCTTCG
ACGAGGTGGTGTCGCAGGGTCTGCTGGGCAAGCTGTGCCGTGCTCGGAGGGCGCAGGGCGCACAGCGTTT
GCGTCGGAGCCGCAGCGAGGAGCGCCCGGAGCGCCTCTTAGTGTCCACGCGCGCTAGCGCCGCTCCCCGC
CGTCCGGATGAGCCACCCCCGCGGAAGGCAACCTCGCTGCTGGGCGGTCGCACTGGCCCTGGGGGTCCTC
GTAGGACGGTTCGAGTTTATAAAGGCAACAAGAGTTTCGGCTTCACTCTGCGAGGCCATGGACCGGTCTG
GATCGAATCTGTCCTGCCTGGCAGCCCGGCTGAAAATGCCTCCCTCAAGTCAGGTGACCGGATCCTCTTC
CTCAATGGATTGGACATGAGGAACTGCTCCCACGACAAGGTGGTGTCCATGTTGCAGGGCAGTGGCGCCA
TGCCCACGCTGGTGGTAGAGGAAGGACCGGTCCCTTTCGCCAGTGATTCAGATTCTCTGGATTCCCCGAC
CCGGGCGTCAGCTCTCACCTCGCTGCAGTGGGTGGCGGATATCCTGCCTTCCAGTATCCGAGTCCAGGGG
AGGACCTTCAGCCAGCAGCTGGACCACCTCCTCACTCCTCCCGAGCGCTATGGAGTCTGCCGAGCTCTCG
AGCGCTTCTTTCAGCACAGGAACATCGATACCCTCATCGTGGATGTCTACCCCGTCCTGGACACACCCGC
CAAGCAGGTACTCTGGCAGTTCCTCTACCAGCTGCTGACCTACGAGGAGCAGGAGCTGTGTCAGGAGAAG
ATCGCGTGCTTCCTCGGCTACACAGCCATGACGGAACCTGAATCCTCACTGGACCTCGAGCCAGAGTCTA
CACCAGAGCCCACACCAGAGCCACAACCACGGAGTTCCCTGAGGGCCTCTTCCATGTGCCGTCGCAGCTT
GCGCTCCCAGGGCCTGGAGACCAGCCTCAGCTGTGGTCCTGGTGACTGCCCTGAGATGCCCCTACCTCTG
ATCCCAGGCGAGCGTCAGGCTGGCGATGGCACATCCCTCCCGGAAACCCCTAACCCCAAAATGATGTCAG
CGGTCTATGCAGAGCTCGAGTCTCGACTGAACAGCAGCTTCAAAGGGAAGATAGGGACCATGTCCAAATC
CCGGGCCTCTCCACCAGTCCCCAGCCTGGTCGGCACATCAGGGCCCAGGACCCTGTCTGGAGTCTCCTGG
CCCAGTGACCGGCTCCTGCCTTCCCCGTGCTATGACCCGCTGTGTTCTGGGGGTCTGGCCTCTCCCAGCA
GCTCGGAATCCCACCCCTACGCCAGCTTGGACAGCAGCAGGGCGCCCTCCCCACAGCCAGGCCTTGGATC
CATCCACGCCGACAGCCCCCCAAGCCCAGACCCCATCCGGCCGCCCAGTCGCCGGAAGCTCTTCGCCTTC
TCACGCCCAGTCCGGAGCCGAGACACAGATCGCTTCCTGGATGCGCTGAGCGAGCAGCTGGGTCCCCGCC
TCAGCATCGTGGATGACTTCCTGACACCCGAGAATGACTATGAAGAGATGAGCTTCCATGATGACCAGGG
CAGCTTTGTGACCAACGAGAGGAGCAGCGCTAGCGAGTGTGTCAGCAGCAGCGAGGAGGGCAGTTCTCTG
ACCTACTCCTCCATCTCCGACCACATCCCCCCACCTCCACTCAGCCCCCCGCCGCCACCGCCCCTGCCTT
TCCATGACCCCAAGCCTAGCTCCCGCACCTCCGATGGTCCCCGAGGTCCCCCTCAGTCATTGACCAAACC
CCTCACCCAGATCAACCATCCAGTCCCACCCCCACCCCCACCCCCTCTACCCCCACCTGTGCCCTGTGCA
CCCCCCATGCTATCCCGAGGCGTGGGCCACCGCCGCAGTGAGACCAGCCATATGAGCGTCAAGCGCTTAC
GCTGGGAACAGGTGGAGAACTCAGAAGGCACCATCTGGGGTCAGCTTGGGGAAGACTCTGACTATGACAA
GCTGAGTGACATGGTGAAATACCTCGACCTGGAGCTCCACTTCGGCACCCAGAAACCTCCGAAGCCAGTG
CCCGGCCCGGAGCCCTTCAGGAAGAAGGAAGTGGTGGAGATCTTGTCCCACAAGAAGGCCTACAATACCT
CCATTCTCCTAGCGCACCTGAAGCTGACCCCTGGCGAGCTGCGGCAAGTGCTCATGAGCATGGAACCCCG
GCGCCTGGAGCCTGCTCATCTGGCGCAGCTGCTGCTCTTCGCTCCTGACGCCGACGAGGAACAGCGATAT
CAGGCTTTCCGCGAGGCTCCGGGTCGCCTCAGTGAGCCGGACCAGTTCGTCCTGCAGATGCTGTCGGTTC
CCGAATACAAGACCCGCCTGCGCAGTCTACACTTCCAGGCTACCTTGCAGGAGAAGACAGAGGAGATACG
AGGCAGCCTCGAGTGTCTGCGACAGGCATCTCTGGAGCTCAAAAACAGCCGGAAACTCGCCAAGATCCTG
GAGTTTGTGTTGGCCATGGGTAACTATCTCAACGATGGACAGCCCAAGACCAACAAGACCACTGGCTTCA
AGATCAACTTCCTGACCGAGCTAAACTCCACCAAGACAGTGGACGGGAAGTCCACCTTTCTGCACATCCT
TGCCAAATCGCTAAGCCAGCACTTCCCTGAGCTCCTGGGCTTTGCCCAGGACCTGCCCACTGTGCCCCTG
GCTGCCAAAGTGAACCAGCGAGCCCTGACTGGTGACCTGGCTGACCTCCATGACACCGTCAGTGAGATTC
AGGTGGCCTGCCAGAGCATGGCCCCTTCCAGTGAGGACAGGTTTGCTGTGGTCATGGCTTCCTTTCTGGA
AACAGCGCAGCCAGCCCTGCGAGCGTTGGATGGTCTGCAGCGAGAGGCCATGGAGGAGCTAGGGAAGGCT
CTGGCCTTCTTCGGAGAGGACTCCAAGGCCACTACCTCAGAGGCCTTCTTTGGCATCTTTTCAGAATTCA
TGAGCAAATTTGAGAGAGCCCTCAGCGACCTGCAGGCAGGGGATGGCCCACGCAGCTCAGGGATGGTGTC
ACCCCTGGCCTGGTGA

Translation (1031 aa):
MGKDQGFSRHFRIFIPKKHRARFDEVVSQGLLGKLCRARRAQGAQRLRRSRSEERPERLLVSTRASAAPR
RPDEPPPRKATSLLGGRTGPGGPRRTVRVYKGNKSFGFTLRGHGPVWIESVLPGSPAENASLKSGDRILF
LNGLDMRNCSHDKVVSMLQGSGAMPTLVVEEGPVPFASDSDSLDSPTRASALTSLQWVADILPSSIRVQG
RTFSQQLDHLLTPPERYGVCRALERFFQHRNIDTLIVDVYPVLDTPAKQVLWQFLYQLLTYEEQELCQEK
IACFLGYTAMTEPESSLDLEPESTPEPTPEPQPRSSLRASSMCRRSLRSQGLETSLSCGPGDCPEMPLPL
IPGERQAGDGTSLPETPNPKMMSAVYAELESRLNSSFKGKIGTMSKSRASPPVPSLVGTSGPRTLSGVSW
PSDRLLPSPCYDPLCSGGLASPSSSESHPYASLDSSRAPSPQPGLGSIHADSPPSPDPIRPPSRRKLFAF
SRPVRSRDTDRFLDALSEQLGPRLSIVDDFLTPENDYEEMSFHDDQGSFVTNERSSASECVSSSEEGSSL
TYSSISDHIPPPPLSPPPPPPLPFHDPKPSSRTSDGPRGPPQSLTKPLTQINHPVPPPPPPPLPPPVPCA
PPMLSRGVGHRRSETSHMSVKRLRWEQVENSEGTIWGQLGEDSDYDKLSDMVKYLDLELHFGTQKPPKPV
PGPEPFRKKEVVEILSHKKAYNTSILLAHLKLTPGELRQVLMSMEPRRLEPAHLAQLLLFAPDADEEQRY
QAFREAPGRLSEPDQFVLQMLSVPEYKTRLRSLHFQATLQEKTEEIRGSLECLRQASLELKNSRKLAKIL
EFVLAMGNYLNDGQPKTNKTTGFKINFLTELNSTKTVDGKSTFLHILAKSLSQHFPELLGFAQDLPTVPL
AAKVNQRALTGDLADLHDTVSEIQVACQSMAPSSEDRFAVVMASFLETAQPALRALDGLQREAMEELGKA
LAFFGEDSKATTSEAFFGIFSEFMSKFERALSDLQAGDGPRSSGMVSPLAW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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