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Report for CCDS21733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21733.1 Public Mus musculus 7 Ric3 23 108 98 CCDS HistoryNCBI Gene:320360Re-query CCDS DB by CCDS ID:21733.1Re-query CCDS DB by GeneID:320360See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21733.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055993.12 ENSMUSP00000056990.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055993.12Link to Ensembl Protein Viewer:ENSMUSP00000056990.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000055993Re-query CCDS DB by Protein ID:ENSMUSP00000056990
Original member Current member NCBI NM_001038624.1 NP_001033713.1 Accepted alive Link to Nucleotide Sequence:NM_001038624.1Link to Protein Sequence:NP_001033713.1Re-query CCDS DB by Nucleotide ID:NM_001038624Re-query CCDS DB by Protein ID:NP_001033713Link to BLAST:NP_001033713.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001033713.1 367 Q8BPM6-1 367 100% 0 0

Chromosomal Locations for CCDS 21733.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 109038444 109038883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109047951 109048096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109054365 109054458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109056744 109056816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109057783 109058009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109083163 109083286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGGCGTACTCCACGGTGCAGAGAGTGGCGCTGGCCTCGGGGCTCGTCCTGGCCGTGTCGCTGCTGCTGC
CCAAGGCCTTCTTGTCTCGCGGGAAGCGACCGGAGCCGCCGCCGGGCCCGGAAGGAAAATTGGACCGATT
TCCACCTATGATGCATCACCACTCGGCACCCTCAGATGGTCAGACACCAGGGGCTCGTTTCCAGAGGTCT
CACCTTGCAGAGGCCTTTGCAAAGGCCAAGGGAGCAGGTGGAGGTGCTGGAGGAGGGGGTAGTGGAAGAG
GACTGATGGGCCAGATCATTCCAATCTATGGCTTTGGGATCTTTTTGTACATACTGTACATTTTGTTTAA
GCTTTCAAAGGGGAAAACTGCAGAGGATCGGAACTGCTCCACTGCCCCACCTGGAAACGCCCACAGGAAG
ATTACCAACTTTGAGCTTGTTCAACTACAAGAAAAACTAAAAGAGACAGAAGAAGCCATGGAAAAATTAA
TCAACAGAGTTGGACCTAATGGTGAGAGCAGAGCACAGGCTGTGACTTCTGACCAAGAGAAACGATTACT
GCATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGCAAGTTCATCGACACATCTCCAGAGAAGGAA
GCTGAGGAAGCCCCATACATGGAGGACTGGGAAGGTTACCCAGAAGAGACTTATCCAATATATGACCTTT
CGGATGGTATCAAGCGTAGGCAAGAAACAATCCTGGTGGATTACCCTGACCTAAAAGAGCCCTCTGCTGA
AGAAATTGCTGAACAAATGGGAGAGATAGAAGAGGAAGGATCAGAGCGTTTGAGCTGGGATCATTTGCCC
ACTGACCCTGGAGCCCAGAAAGATAATTCTGTTGCCCCGTGTGATCCCAAACCAGAATCATGCTCCTGCT
GTGTTCATGAAGAGGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGA
GCAAGAGGAAGCCACCAAGGAAAACTTGCCCCAGGACTTTACAAATGAAGGGCTGGGAGTCAGCACTGAT
AATGCACACGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAGTGA

Translation (367 aa):
MAYSTVQRVALASGLVLAVSLLLPKAFLSRGKRPEPPPGPEGKLDRFPPMMHHHSAPSDGQTPGARFQRS
HLAEAFAKAKGAGGGAGGGGSGRGLMGQIIPIYGFGIFLYILYILFKLSKGKTAEDRNCSTAPPGNAHRK
ITNFELVQLQEKLKETEEAMEKLINRVGPNGESRAQAVTSDQEKRLLHQLREITRVMKEGKFIDTSPEKE
AEEAPYMEDWEGYPEETYPIYDLSDGIKRRQETILVDYPDLKEPSAEEIAEQMGEIEEEGSERLSWDHLP
TDPGAQKDNSVAPCDPKPESCSCCVHEEEDPAVLAENAGFSADGYSEQEEATKENLPQDFTNEGLGVSTD
NAHVGGMLRKRNPQGFE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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