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Report for CCDS805.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
805.2 Public Homo sapiens 1 AMPD2 24 110 108 CCDS HistoryNCBI Gene:271Re-query CCDS DB by CCDS ID:805.2Re-query CCDS DB by GeneID:271See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 805.1
The coding region has been updated to start at a downstream in-frame start codon that is supported by conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 805.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256578.8 ENSP00000256578.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000256578.8Link to Ensembl Protein Viewer:ENSP00000256578.4Re-query CCDS DB by Nucleotide ID:ENST00000256578Re-query CCDS DB by Protein ID:ENSP00000256578
Original member Current member EBI ENST00000528667.7 ENSP00000436541.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000528667.7Link to Ensembl Protein Viewer:ENSP00000436541.2Re-query CCDS DB by Nucleotide ID:ENST00000528667Re-query CCDS DB by Protein ID:ENSP00000436541
Original member Current member NCBI NM_001368809.2 NP_001355738.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001368809.2Link to Protein Sequence:NP_001355738.1Re-query CCDS DB by Nucleotide ID:NM_001368809Re-query CCDS DB by Protein ID:NP_001355738Link to BLAST:NP_001355738.1
Original member Current member NCBI NM_004037.9 NP_004028.4 Accepted alive Link to Nucleotide Sequence:NM_004037.9Link to Protein Sequence:NP_004028.4Re-query CCDS DB by Nucleotide ID:NM_004037Re-query CCDS DB by Protein ID:NP_004028Link to BLAST:NP_004028.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355738.1 825 Q01433-1 825 100% 0 0
NP_004028.4 825 Q01433-1 825 100% 0 0

Chromosomal Locations for CCDS 805.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109621176 109621266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109625303 109625433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109625662 109625792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109626160 109626228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109626319 109626427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109626726 109626912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109627175 109627316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109627429 109627518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109627774 109627903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109628083 109628277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109628364 109628495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109628643 109628806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109629109 109629235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109629327 109629490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109629796 109629916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109630233 109630406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109630683 109630793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109630943 109631152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2478 nt):
ATGGCATCCTATCCATCTGGCTCTGGCAAGCCCAAGGCCAAATATCCCTTTAAGAAGCGGGCCAGCCTGC
AGGCCTCCACTGCAGCTCCAGAGGCTCGGGGTGGTCTGGGGGCCCCTCCGCTGCAGTCTGCCCGATCCCT
GCCGGGCCCCGCCCCCTGCCTCAAGCACTTCCCGCTCGACCTGCGCACGTCTATGGATGGCAAATGCAAG
GAGATCGCCGAGGAGCTGTTCACCCGCTCACTGGCTGAGAGCGAGCTCCGTAGTGCCCCGTATGAGTTCC
CCGAGGAGAGCCCCATTGAACAGCTGGAGGAGCGGCGGCAGCGGCTGGAGCGGCAGATCAGCCAGGATGT
CAAGCTGGAGCCAGACATCCTGCTTCGGGCCAAGCAAGATTTCCTGAAGACGGACAGTGACTCGGACCTA
CAGCTCTACAAGGAACAGGGTGAGGGGCAGGGTGACCGGAGCCTGCGGGAGCGTGATGTGCTGGAACGGG
AGTTTCAGCGGGTCACCATCTCTGGGGAGGAGAAGTGTGGGGTGCCGTTCACAGACCTGCTGGATGCAGC
CAAGAGTGTGGTGCGGGCGCTCTTCATCCGGGAGAAGTACATGGCCCTGTCCCTGCAGAGCTTCTGCCCC
ACCACCCGCCGCTACCTGCAGCAGCTGGCTGAAAAGCCTCTGGAGACCCGGACCTATGAACAGGGCCCCG
ACACCCCTGTGTCTGCTGATGCCCCGGTGCACCCCCCTGCGCTGGAGCAGCACCCGTATGAGCACTGTGA
GCCAAGCACCATGCCTGGGGACCTGGGCTTGGGTCTGCGCATGGTGCGGGGTGTGGTGCACGTCTACACC
CGCAGGGAACCCGACGAGCATTGCTCAGAGGTGGAGCTGCCATACCCTGACCTGCAGGAATTTGTGGCTG
ACGTCAATGTGCTGATGGCCCTGATTATCAATGGCCCCATAAAGTCATTCTGCTACCGCCGGCTGCAGTA
CCTGAGCTCCAAGTTCCAGATGCATGTGCTACTCAATGAGATGAAGGAGCTGGCCGCCCAGAAGAAAGTG
CCACACCGAGATTTCTACAACATCCGCAAGGTGGACACCCACATCCATGCCTCGTCCTGCATGAACCAGA
AGCATCTGCTGCGCTTCATCAAGCGGGCAATGAAGCGGCACCTGGAGGAGATCGTGCACGTGGAGCAGGG
CCGTGAACAGACGCTGCGGGAGGTCTTTGAGAGCATGAATCTCACGGCCTACGACCTGAGTGTGGACACG
CTGGATGTGCATGCGGACAGGAACACTTTCCATCGCTTTGACAAGTTTAATGCCAAATACAACCCTATTG
GGGAGTCCGTCCTCCGAGAGATCTTCATCAAGACGGACAACAGGGTATCTGGGAAGTACTTTGCTCACAT
CATCAAGGAGGTGATGTCAGACCTGGAGGAGAGCAAATACCAGAATGCAGAGCTGCGGCTCTCCATTTAC
GGGCGCTCGAGGGATGAGTGGGACAAGCTGGCGCGCTGGGCCGTCATGCACCGCGTGCACTCCCCCAACG
TGCGCTGGCTGGTGCAGGTGCCCCGCCTCTTTGATGTGTACCGTACCAAGGGCCAGCTGGCCAACTTCCA
GGAGATGCTGGAGAACATCTTCCTGCCACTGTTCGAGGCCACTGTGCACCCTGCCAGCCACCCGGAACTG
CATCTCTTCTTAGAGCACGTGGATGGTTTTGACAGCGTGGATGATGAGTCCAAGCCTGAAAACCATGTCT
TCAACCTGGAGAGCCCCCTGCCTGAGGCGTGGGTGGAGGAGGACAACCCACCCTATGCCTACTACCTGTA
CTACACCTTTGCCAACATGGCCATGTTGAACCACCTGCGCAGGCAGAGGGGCTTCCACACGTTTGTGCTG
AGGCCACACTGTGGGGAGGCTGGGCCCATCCACCACCTGGTGTCAGCCTTCATGCTGGCTGAGAACATTT
CCCACGGGCTCCTTCTGCGCAAGGCCCCCGTCCTGCAGTACCTGTACTACCTGGCCCAGATCGGCATCGC
CATGTCTCCGCTCAGCAACAACAGCCTCTTCCTCAGCTATCACCGGAATCCGCTACCGGAGTACCTGTCC
CGCGGCCTCATGGTCTCCCTGTCCACTGATGATCCCTTGCAGTTCCACTTCACCAAGGAGCCGCTGATGG
AGGAGTACAGCATCGCCACCCAGGTGTGGAAGCTCAGCTCCTGCGATATGTGTGAGCTGGCCCGCAACAG
CGTGCTCATGAGCGGCTTCTCGCACAAGGTAAAGAGCCACTGGCTGGGACCCAACTATACCAAGGAAGGC
CCTGAGGGGAATGACATCCGCCGGACCAATGTGCCAGACATCCGCGTGGGCTACCGCTACGAGACCCTGT
GCCAGGAGCTGGCGCTCATCACGCAGGCAGTCCAGAGTGAGATGCTGGAGACCATTCCAGAGGAGGCGGG
TATCACCATGAGCCCAGGGCCTCAATGA

Translation (825 aa):
MASYPSGSGKPKAKYPFKKRASLQASTAAPEARGGLGAPPLQSARSLPGPAPCLKHFPLDLRTSMDGKCK
EIAEELFTRSLAESELRSAPYEFPEESPIEQLEERRQRLERQISQDVKLEPDILLRAKQDFLKTDSDSDL
QLYKEQGEGQGDRSLRERDVLEREFQRVTISGEEKCGVPFTDLLDAAKSVVRALFIREKYMALSLQSFCP
TTRRYLQQLAEKPLETRTYEQGPDTPVSADAPVHPPALEQHPYEHCEPSTMPGDLGLGLRMVRGVVHVYT
RREPDEHCSEVELPYPDLQEFVADVNVLMALIINGPIKSFCYRRLQYLSSKFQMHVLLNEMKELAAQKKV
PHRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEIVHVEQGREQTLREVFESMNLTAYDLSVDT
LDVHADRNTFHRFDKFNAKYNPIGESVLREIFIKTDNRVSGKYFAHIIKEVMSDLEESKYQNAELRLSIY
GRSRDEWDKLARWAVMHRVHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLPLFEATVHPASHPEL
HLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRRQRGFHTFVL
RPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSYHRNPLPEYLS
RGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEG
PEGNDIRRTNVPDIRVGYRYETLCQELALITQAVQSEMLETIPEEAGITMSPGPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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