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Report for CCDS60312.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60312.1 Public Homo sapiens 1 FCRL6 24 110 108 CCDS HistoryNCBI Gene:343413Re-query CCDS DB by CCDS ID:60312.1Re-query CCDS DB by GeneID:343413See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60312.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321935.10 ENSP00000320625.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321935.10Link to Ensembl Protein Viewer:ENSP00000320625.6Re-query CCDS DB by Nucleotide ID:ENST00000321935Re-query CCDS DB by Protein ID:ENSP00000320625
Original member Current member NCBI NM_001284217.2 NP_001271146.1 Accepted alive Link to Nucleotide Sequence:NM_001284217.2Link to Protein Sequence:NP_001271146.1Re-query CCDS DB by Nucleotide ID:NM_001284217Re-query CCDS DB by Protein ID:NP_001271146Link to BLAST:NP_001271146.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271146.1 413 Q6DN72-2 413 100% 0 0

Chromosomal Locations for CCDS 60312.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 159800598 159800613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159802420 159802455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159806596 159806616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159808178 159808444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159808961 159809245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159809402 159809683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159810094 159810216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159813489 159813554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159814221 159814292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159815428 159815459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159815541 159815582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGTTGCCATCTTTAGGCCCCATGCTGCTCTGGACGGCTGTGCTGCTCTTTGTTCCCTGTGTTGGGAAAA
CTGTCTGGCTGTACCTCCAAGCCTGGCCAAACCCTGTGTTTGAAGGAGATGCCCTGACTCTGCGATGTCA
GGGATGGAAGAATACACCACTGTCTCAGGTGAAGTTCTACAGAGATGGAAAATTCCTTCATTTCTCTAAG
GAAAACCAGACTCTGTCCATGGGAGCAGCAACAGTGCAGAGCCGTGGCCAGTACAGCTGCTCTGGGCAGG
TGATGTATATTCCACAGACATTCACACAAACTTCAGAGACTGCCATGGTTCAAGTCCAAGAGCTGTTTCC
ACCTCCTGTGCTGAGTGCCATCCCCTCTCCTGAGCCCCGAGAGGGTAGCCTGGTGACCCTGAGATGTCAG
ACAAAGCTGCACCCCCTGAGGTCAGCCTTGAGGCTCCTTTTCTCCTTCCACAAGGACGGCCACACCTTGC
AGGACAGGGGCCCTCACCCAGAACTCTGCATCCCGGGAGCCAAGGAGGGAGACTCTGGGCTTTACTGGTG
TGAGGTGGCCCCTGAGGGTGGCCAGGTCCAGAAGCAGAGCCCCCAGCTGGAGGTCAGAGTGCAGGCTCCT
GTATCCCGTCCTGTGCTCACTCTGCACCACGGGCCTGCTGACCCTGCTGTGGGGGACATGGTGCAGCTCC
TCTGTGAGGCACAGAGGGGCTCCCCTCCGATCCTGTATTCCTTCTACCTTGATGAGAAGATTGTGGGGAA
CCACTCAGCTCCCTGTGGTGGAACCACCTCCCTCCTCTTCCCAGTGAAGTCAGAACAGGATGCTGGGAAC
TACTCCTGCGAGGCTGAGAACAGTGTCTCCAGAGAGAGGAGTGAGCCCAAGAAGCTGTCTCTGAAGGGTT
CTCAAGTCTTGTTCACTCCCGCCAGCAACTGGCTGGTTCCTTGGCTTCCTGCGAGCCTGCTTGGCCTGAT
GGTTATTGCTGCTGCACTTCTGGTTTATGTGAGATCCTGGAGAAAAGCTGGGCCCCTTCCATCCCAGATA
CCACCCACAGCTCCAGGTGGAGAGCAGTGCCCACTATATGCCAACGTGCATCACCAGAAAGGGAAAGATG
AAGGTGTTGTCTACTCTGTGGTGCATAGAACCTCAAAGAGGAGTGAAGCCAGGTCTGCTGAGTTCACCGT
GGGGAGAAAGTTCTATCATCTGTGCGGAGGTGAGATGCCTGCAGCCCAGTGA

Translation (413 aa):
MLPSLGPMLLWTAVLLFVPCVGKTVWLYLQAWPNPVFEGDALTLRCQGWKNTPLSQVKFYRDGKFLHFSK
ENQTLSMGAATVQSRGQYSCSGQVMYIPQTFTQTSETAMVQVQELFPPPVLSAIPSPEPREGSLVTLRCQ
TKLHPLRSALRLLFSFHKDGHTLQDRGPHPELCIPGAKEGDSGLYWCEVAPEGGQVQKQSPQLEVRVQAP
VSRPVLTLHHGPADPAVGDMVQLLCEAQRGSPPILYSFYLDEKIVGNHSAPCGGTTSLLFPVKSEQDAGN
YSCEAENSVSRERSEPKKLSLKGSQVLFTPASNWLVPWLPASLLGLMVIAAALLVYVRSWRKAGPLPSQI
PPTAPGGEQCPLYANVHHQKGKDEGVVYSVVHRTSKRSEARSAEFTVGRKFYHLCGGEMPAAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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