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Report for CCDS44461.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44461.1 Public Homo sapiens 10 TCTN3 24 110 108 CCDS HistoryNCBI Gene:26123Re-query CCDS DB by CCDS ID:44461.1Re-query CCDS DB by GeneID:26123See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44461.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000430368.6 ENSP00000387567.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430368.6Link to Ensembl Protein Viewer:ENSP00000387567.1Re-query CCDS DB by Nucleotide ID:ENST00000430368Re-query CCDS DB by Protein ID:ENSP00000387567
Original member Current member NCBI NM_001143973.2 NP_001137445.1 Accepted alive Link to Nucleotide Sequence:NM_001143973.2Link to Protein Sequence:NP_001137445.1Re-query CCDS DB by Nucleotide ID:NM_001143973Re-query CCDS DB by Protein ID:NP_001137445Link to BLAST:NP_001137445.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137445.1 459 Q6NUS6-5 459 100% 0 0

Chromosomal Locations for CCDS 44461.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 95664067 95664300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95680472 95680609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95682651 95682804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95683101 95683195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95683522 95683629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95686495 95686530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95687044 95687159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95692920 95693038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95693353 95693476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95693644 95693899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1380 nt):
ATGCGCACCCCACAGCTCGCGCTCCTGCAAGTGTTCTTTCTGGTGTTCCCCGATGGCGTCCGGCCTCAGC
CCTCTTCCTCCCCATCAGGGGCAGTGCCCACGTCTTTGGAGCTGCAGCGAGGGACGGATGGCGGAACCCT
CCAGTCCCCTTCAGAGGCGACTGCAACTCGCCCGGCCGTGCCTGGACTCCCTACAGTGGTCCCTACTCTC
GTGACTCCCTCGGCCCCTGGGAATAGGACTGTGGACCTCTTCCCAGTCTTACCGATCTGTGTCTGTGACT
TGACTCCTGGAGCCTGCGATATAAATTGCTGCTGCGACAGGGACTGCTATCTTCTCCATCCGAGGACAGT
TTTCTCCTTCTGCCTTCCAGGCAGCGTAAGGTCTTCAAGCTGGGTTTGTGTAGACAACTCTGTTATCTTC
AGGAGTAATTCCCCGTTTCCTTCAAGAGTTTTCATGGATTCTAATGGAATCAGGCAGTTTTGTGTCCATG
TGAACAACTGTTTCCTAGAGAGTAAAAGTACAACTTGCACTCGTTTTTTCAAGAACCTGGCTAGTAGCTG
TACCTTGGATTCAGCCCTCAATGCTGCCTCTTACTATAACTTCACAGTCTTAAAGGTTCCAAGAAGCATG
ACTGATCCACAGAATATGGAGGCTTTTCAACAGAGCACAGCTGCTTCTCTCACCAGTCCTAGAAGTGGGA
ATCCTGGCTATATAGTTGGGAAGCCACTCTTGGCTCTGACTGATGATATAAGTTACTCAATGACCCTCTT
ACAGAGCCAGGGTAATGGAAGTTGCTCTGTTAAAAGACATGAAGTGCAGTTTGGAGTGAATGCAATATCT
GGATGCAAGCTCAGGTTGAAGAAGGCAGACTGCAGCCACTTGCAGCAGGAGATTTATCAGACTCTTCATG
GAAGGCCCAGACCAGAGTATGTTGCCATCTTTGGTAATGCTGACCCAGCCCAGAAAGGAGGGTGGACCAG
GATCCTCAACAGGCACTGCAGCATTTCAGCTATAAACTGTACTTCCTGCTGTCTCATACCAGTTTCCCTG
GAGATCCAGGTATTGTGGGCATATGTAGGTCTCCTGTCCAACCCGCAAGCTCATGTATCAGGAGTTCGAT
TCCTATACCAGTGCCAGTCTATACAGGATTCTCAGCAAGTTACAGAAGTATCTTTGACAACTCTTGTGAA
CTTTGTGGACATTACCCAGAAGCCACAGCCTCCAAGGGGCCAACCCAAAATGGACTGGAAATGGCCATTC
GACTTCTTTCCCTTCAAAGTGGCATTCAGCAGAGGAGTATTCTCTCAAAAATGCTCAGTCTCTCCCATCC
TTATCCTGTGCCTCTTACTACTTGGAGTTCTCAACCTAGAGACTATGTGA

Translation (459 aa):
MRTPQLALLQVFFLVFPDGVRPQPSSSPSGAVPTSLELQRGTDGGTLQSPSEATATRPAVPGLPTVVPTL
VTPSAPGNRTVDLFPVLPICVCDLTPGACDINCCCDRDCYLLHPRTVFSFCLPGSVRSSSWVCVDNSVIF
RSNSPFPSRVFMDSNGIRQFCVHVNNCFLESKSTTCTRFFKNLASSCTLDSALNAASYYNFTVLKVPRSM
TDPQNMEAFQQSTAASLTSPRSGNPGYIVGKPLLALTDDISYSMTLLQSQGNGSCSVKRHEVQFGVNAIS
GCKLRLKKADCSHLQQEIYQTLHGRPRPEYVAIFGNADPAQKGGWTRILNRHCSISAINCTSCCLIPVSL
EIQVLWAYVGLLSNPQAHVSGVRFLYQCQSIQDSQQVTEVSLTTLVNFVDITQKPQPPRGQPKMDWKWPF
DFFPFKVAFSRGVFSQKCSVSPILILCLLLLGVLNLETM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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