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Report for CCDS8023.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8023.2 Public Homo sapiens 11 EML3 24 110 108 CCDS HistoryNCBI Gene:256364Re-query CCDS DB by CCDS ID:8023.2Re-query CCDS DB by GeneID:256364See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8023.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394773.7 ENSP00000378254.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394773.7Link to Ensembl Protein Viewer:ENSP00000378254.2Re-query CCDS DB by Nucleotide ID:ENST00000394773Re-query CCDS DB by Protein ID:ENSP00000378254
Original member Current member NCBI NM_153265.3 NP_694997.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153265.3Link to Protein Sequence:NP_694997.2Re-query CCDS DB by Nucleotide ID:NM_153265Re-query CCDS DB by Protein ID:NP_694997Link to BLAST:NP_694997.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694997.2 896 Q32P44-1 896 100% 0 0

Chromosomal Locations for CCDS 8023.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62602475 62602678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62602759 62602889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62603149 62603247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62603729 62603816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62603944 62604041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62604113 62604201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62605113 62605180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62605642 62605773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62605855 62605980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62606063 62606214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62606958 62607099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62607666 62607821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62608201 62608296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62608542 62608652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62608736 62608805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62608962 62609132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62609354 62609477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62609629 62609696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62610879 62610992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62611087 62611344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62611425 62611596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62612436 62612457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2691 nt):
ATGGACGGGGCCGCGGGGCCCGGTGACGGCCCTGCTCGGGAGGCCCTCCAGTCTCTGAGCCAGCGGCTTC
GGGTGCAGGAGCAGGAGATGGAACTGGTAAAGGCAGCCCTGGCAGAAGCCCTTCGCCTGCTGCGGCTGCA
GGTGCCCCCTTCCTCCCTGCAGGGCTCTGGCACACCAGCTCCTCCGGGGGACAGTCTTGCAGCCCCCCCA
GGACTGCCACCCACGTGCACCCCTTCCTTGGTGAGCCGAGGCACCCAGACGGAGACAGAGGTGGAGCTCA
AGTCATCCCCTGGACCCCCTGGCCTGAGCAATGGACCCCCAGCCCCTCAGGGGGCCAGCGAAGAGCCTAG
CGGGACCCAATCTGAAGGAGGGGGCAGCAGCAGCAGTGGTGCTGGCTCCCCTGGCCCCCCGGGGATCCTC
AGGCCCTTGCAGCCCCCACAGCGTGCTGACACGCCGCGAAGAAATTCTTCCTCCTCCTCATCCCCCTCAG
AGCGGCCTCGGCAGAAGCTCTCCAGGAAGGCAATCTCCTCCGCCAACCTGTTAGTGCGGTCCGGGAGCAC
AGAGAGCCGTGGGGGAAAAGACCCCCTCTCCAGCCCTGGGGGCCCTGGATCTCGGAGGAGCAATTACAAT
TTGGAAGGCATCTCAGTGAAGATGTTCCTTCGAGGGCGCCCCATTACCATGTACATCCCGTCTGGCATCC
GCAGCCTTGAGGAGCTGCCGAGTGGCCCACCGCCAGAGACCCTCAGCCTTGACTGGGTTTATGGGTACAG
GGGTCGTGACTCCCGCTCTAATCTGTTTGTGTTGCGCTCTGGGGAGGTGGTCTACTTTATCGCCTGTGTG
GTGGTGCTGTACCGGCCTGGAGGAGGCCCAGGGGGTCCTGGAGGTGGCGGCCAGAGACATTACCGGGGGC
ACACAGACTGCGTTCGATGCCTTGCTGTTCACCCTGATGGTGTTCGGGTAGCCTCGGGACAGACAGCTGG
AGTGGATAAGGATGGAAAGCCCCTGCAGCCTGTGGTTCACATCTGGGACTCAGAGACGCTGTTGAAACTG
CAGGAGATTGGACTGGGGGCCTTCGAGCGGGGTGTTGGGGCCCTGGCCTTTTCAGCTGCGGATCAGGGTG
CCTTTCTTTGTGTGGTGGATGATTCCAATGAGCACATGCTGTCGGTGTGGGACTGCAGCCGGGGAATGAA
GCTGGCTGAGATCAAGAGTACAAATGACTCAGTCCTGGCCGTTGGCTTCAACCCTCGTGACAGCAGCTGC
ATCGTCACCAGTGGGAAATCTCACGTCCACTTCTGGAATTGGAGTGGTGGAGTAGGGGTTCCTGGGAATG
GGACCCTTACCCGGAAACAGGGTGTCTTTGGGAAATACAAGAAACCCAAGTTTATCCCTTGCTTTGTGTT
CCTTCCGGATGGAGACATTCTCACTGGAGACTCAGAGGGGAACATTCTCACCTGGGGGCGGAGCCCTTCA
GATTCCAAGACCCCAGGCAGGGGTGGCGCCAAAGAGACCTATGGGATTGTGGCCCAGGCTCACGCTCATG
AAGGTTCTATCTTCGCCTTGTGTCTCCGGAGGGACGGGACAGTGCTGAGTGGTGGCGGGCGGGACCGCCG
GCTGGTACAGTGGGGGCCCGGGTTGGTGGCCCTCCAGGAGGCTGAGATTCCCGAGCACTTCGGGGCCGTG
CGAGCCATTGCTGAAGGGCTTGGCTCTGAGCTGCTGGTGGGAACCACGAAGAATGCATTGCTGAGGGGAG
ACCTGGCCCAGGGCTTCTCCCCTGTAATCCAGGGCCACACTGATGAGCTCTGGGGGCTCTGCACACACCC
CTCCCAGAACCGCTTCCTCACCTGCGGCCACGACCGGCAGCTCTGCCTGTGGGATGGGGAGAGCCATGCA
CTGGCCTGGAGCATCGACCTCAAGGAGACTGGTCTCTGTGCTGACTTCCACCCGAGTGGGGCAGTTGTGG
CCGTAGGACTGAACACGGGGAGGTGGTTGGTTTTGGACACAGAGACCAGAGAGATCGTGTCTGATGTCAT
TGATGGCAATGAGCAGCTCTCAGTGGTCCGGTACAGCCCAGATGGGTTGTACCTGGCCATTGGTTCCCAT
GACAACGTGATCTACATCTATAGTGTTTCCAGTGATGGTGCCAAATCCAGCCGCTTTGGCCGCTGTATGG
GTCACTCCAGCTTCATCACTCATCTTGACTGGTCCAAGGATGGGAATTTCATCATGTCCAATTCTGGGGA
CTATGAGATTCTTTACTGGGACGTGGCTGGAGGCTGCAAGCAGCTGAAGAATCGCTATGAGAGCCGAGAC
CGGGAATGGGCTACCTACACCTGTGTGCTGGGCTTTCACGTCTACGGCGTCTGGCCGGACGGCTCCGATG
GGACCGACATCAACTCCCTGTGCCGCTCCCACAACGAGCGCGTGGTGGCGGTGGCCGACGACTTCTGCAA
AGTGCATCTCTTCCAGTACCCGTGCGCTCGTGCCAAGGCGCCGAGCCGCATGTACGGGGGCCACGGCAGC
CACGTGACCAGCGTCCGATTCACGCACGACGACTCGCACCTCGTCTCGCTGGGCGGCAAGGACGCCAGCA
TCTTCCAGTGGCGAGTGCTGGGCGCTGGGGGCGCGGGGCCGGCGCCCGCCACGCCCTCTCGAACCCCCTC
CCTGTCCCCCGCCTCCTCCCTCGACGTTTGA

Translation (896 aa):
MDGAAGPGDGPAREALQSLSQRLRVQEQEMELVKAALAEALRLLRLQVPPSSLQGSGTPAPPGDSLAAPP
GLPPTCTPSLVSRGTQTETEVELKSSPGPPGLSNGPPAPQGASEEPSGTQSEGGGSSSSGAGSPGPPGIL
RPLQPPQRADTPRRNSSSSSSPSERPRQKLSRKAISSANLLVRSGSTESRGGKDPLSSPGGPGSRRSNYN
LEGISVKMFLRGRPITMYIPSGIRSLEELPSGPPPETLSLDWVYGYRGRDSRSNLFVLRSGEVVYFIACV
VVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAGVDKDGKPLQPVVHIWDSETLLKL
QEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEHMLSVWDCSRGMKLAEIKSTNDSVLAVGFNPRDSSC
IVTSGKSHVHFWNWSGGVGVPGNGTLTRKQGVFGKYKKPKFIPCFVFLPDGDILTGDSEGNILTWGRSPS
DSKTPGRGGAKETYGIVAQAHAHEGSIFALCLRRDGTVLSGGGRDRRLVQWGPGLVALQEAEIPEHFGAV
RAIAEGLGSELLVGTTKNALLRGDLAQGFSPVIQGHTDELWGLCTHPSQNRFLTCGHDRQLCLWDGESHA
LAWSIDLKETGLCADFHPSGAVVAVGLNTGRWLVLDTETREIVSDVIDGNEQLSVVRYSPDGLYLAIGSH
DNVIYIYSVSSDGAKSSRFGRCMGHSSFITHLDWSKDGNFIMSNSGDYEILYWDVAGGCKQLKNRYESRD
REWATYTCVLGFHVYGVWPDGSDGTDINSLCRSHNERVVAVADDFCKVHLFQYPCARAKAPSRMYGGHGS
HVTSVRFTHDDSHLVSLGGKDASIFQWRVLGAGGAGPAPATPSRTPSLSPASSLDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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