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Report for CCDS10329.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10329.2 Public Homo sapiens 15 ZSCAN2 24 110 108 CCDS HistoryNCBI Gene:54993Re-query CCDS DB by CCDS ID:10329.2Re-query CCDS DB by GeneID:54993See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10329.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448803.6 ENSP00000410198.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000448803.6Link to Ensembl Protein Viewer:ENSP00000410198.2Re-query CCDS DB by Nucleotide ID:ENST00000448803Re-query CCDS DB by Protein ID:ENSP00000410198
Original member Current member EBI ENST00000540894.5 ENSP00000441855.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540894.5Link to Ensembl Protein Viewer:ENSP00000441855.1Re-query CCDS DB by Nucleotide ID:ENST00000540894Re-query CCDS DB by Protein ID:ENSP00000441855
Original member Current member EBI ENST00000546148.6 ENSP00000445451.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000546148.6Link to Ensembl Protein Viewer:ENSP00000445451.1Re-query CCDS DB by Nucleotide ID:ENST00000546148Re-query CCDS DB by Protein ID:ENSP00000445451
Original member Current member NCBI NM_181877.4 NP_870992.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181877.4Link to Protein Sequence:NP_870992.2Re-query CCDS DB by Nucleotide ID:NM_181877Re-query CCDS DB by Protein ID:NP_870992Link to BLAST:NP_870992.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_870992.2 614 Q7Z7L9-1 614 100% 0 0

Chromosomal Locations for CCDS 10329.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84603928 84604333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84620602 84622040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1845 nt):
ATGATGGCTGCAGACATCCCGAGAGTGACCACTCCGCTGAGCTCCTTGGTCCAGGTGCCTCAAGAGGAAG
ATAGACAGGAGGAGGAGGTCACCACCATGATCCTGGAGGATGACTCCTGGGTGCAAGAAGCTGTGCTGCA
GGAGGATGGCCCTGAGTCTGAGCCCTTTCCCCAGAGTGCTGGCAAGGGCGGCCCCCAGGAGGAGGTGACC
AGGGGACCACAGGGTGCACTCGGCCGCCTCCGAGAGCTCTGCCGGCGCTGGCTGAGACCAGAGGTACACA
CCAAGGAGCAGATGTTAACCATGCTGCCAAAGGAAATTCAGGCTTGGCTGCAAGAGCATCGGCCTGAAAG
CAGTGAGGAGGCAGCGGCCCTGGTGGAAGACTTGACCCAGACCCTTCAGGACAGTGATTTTGAGATACAG
AGTGAAAATGGGGAGAACTGTAATCAAGACATGTTTGAGAATGAATCACGTAAGATATTCTCGGAAATGC
CTGAAGGTGAAAGTGCTCAGCACTCCGATGGGGAAAGTGACTTTGAGAGAGATGCTGGCATCCAGAGGCT
CCAGGGACACAGCCCAGGTGAGGACCACGGGGAGGTGGTTTCTCAGGACAGGGAAGTTGGCCAGCTCATA
GGCCTGCAGGGCACCTACCTAGGGGAGAAGCCCTACGAATGTCCCCAGTGTGGGAAGACCTTCAGCCGGA
AATCCCACCTCATCACACACGAGAGGACCCACACAGGAGAGAAATACTACAAATGTGATGAATGTGGAAA
AAGCTTTAGTGATGGTTCAAATTTTAGTAGACACCAAACCACTCACACCGGGGAGAAGCCCTACAAATGC
AGAGACTGTGGGAAGAGCTTTAGCCGGAGTGCCAACCTCATAACCCACCAGAGGATCCACACGGGGGAAA
AGCCCTTCCAGTGTGCCGAGTGTGGCAAGAGCTTCAGCAGGAGTCCCAACCTCATTGCACATCAGCGCAC
CCACACAGGAGAGAAACCCTACTCGTGCCCCGAGTGTGGAAAGAGCTTTGGCAACCGATCCAGCCTTAAC
ACGCATCAGGGGATCCACACTGGAGAAAAGCCCTACGAATGTAAAGAATGCGGCGAAAGCTTTAGTTACA
ACTCCAATCTAATCAGACACCAGAGAATCCACACAGGAGAGAAACCCTACAAATGTACCGACTGTGGGCA
GAGGTTCAGCCAGAGTTCAGCCCTCATCACCCACCGGAGAACCCACACAGGAGAGAAACCCTACCAGTGC
AGCGAGTGTGGGAAAAGCTTCAGCCGCAGCTCTAACCTGGCCACACACCGGAGAACCCACATGGTGGAGA
AGCCCTATAAGTGTGGGGTGTGTGGGAAGAGCTTCAGCCAGAGCTCCAGTCTGATTGCACACCAGGGCAT
GCACACAGGGGAGAAACCCTACGAGTGCCTGACATGTGGGGAGAGCTTCAGCTGGAGCTCCAACCTCCTC
AAGCACCAGAGGATCCACACGGGAGAGAAACCCTACAAATGCAGCGAGTGTGGGAAATGCTTCAGCCAGC
GCTCCCAGCTCGTAGTGCACCAGCGGACCCACACGGGCGAGAAGCCCTACAAATGCCTCATGTGCGGCAA
GAGCTTCAGCCGGGGCTCCATTCTGGTCATGCACCAGAGAGCCCATTTGGGAGACAAGCCCTACAGGTGC
CCTGAGTGTGGGAAAGGCTTTAGCTGGAACTCAGTCCTCATTATACATCAGCGAATCCACACTGGGGAGA
AGCCCTACAAATGCCCCGAGTGTGGCAAAGGCTTCAGCAACAGCTCTAACTTTATCACACATCAGAGAAC
TCACATGAAAGAGAAACTTTATTGA

Translation (614 aa):
MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVT
RGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEEAAALVEDLTQTLQDSDFEIQ
SENGENCNQDMFENESRKIFSEMPEGESAQHSDGESDFERDAGIQRLQGHSPGEDHGEVVSQDREVGQLI
GLQGTYLGEKPYECPQCGKTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKC
RDCGKSFSRSANLITHQRIHTGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLN
THQGIHTGEKPYECKECGESFSYNSNLIRHQRIHTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQC
SECGKSFSRSSNLATHRRTHMVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKPYECLTCGESFSWSSNLL
KHQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRC
PECGKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSNFITHQRTHMKEKLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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