NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS61813.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61813.1 Public Homo sapiens 16 ZSCAN10 24 110 108 CCDS HistoryNCBI Gene:84891Re-query CCDS DB by CCDS ID:61813.1Re-query CCDS DB by GeneID:84891See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61813.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000575108.5 ENSP00000459520.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575108.5Link to Ensembl Protein Viewer:ENSP00000459520.1Re-query CCDS DB by Nucleotide ID:ENST00000575108Re-query CCDS DB by Protein ID:ENSP00000459520
Original member Current member NCBI NM_001282415.2 NP_001269344.1 Accepted alive Link to Nucleotide Sequence:NM_001282415.2Link to Protein Sequence:NP_001269344.1Re-query CCDS DB by Nucleotide ID:NM_001282415Re-query CCDS DB by Protein ID:NP_001269344Link to BLAST:NP_001269344.1
Original member Current member NCBI NM_001365273.1 NP_001352202.1 Accepted alive Link to Nucleotide Sequence:NM_001365273.1Link to Protein Sequence:NP_001352202.1Re-query CCDS DB by Nucleotide ID:NM_001365273Re-query CCDS DB by Protein ID:NP_001352202Link to BLAST:NP_001352202.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269344.1 386 Q96SZ4-2 386 100% 0 0
NP_001352202.1 386 Q96SZ4-2 386 100% 0 0

Chromosomal Locations for CCDS 61813.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3089091 3090251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1161 nt):
ATGCGCACTCACACGGACGAGCGGCCGCACGCCTGCCACCTGTGCGGCCACCGCTTCCGCCAGAGCTCGC
ACCTGAGCAAGCACCTGCTGACCCACTCCTCCGAACCCGCCTTCCTGTGCGCAGAGTGCGGCCGCGGCTT
CCAGCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGCTCCT
GAGAGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTGTGCTCCCACTGCGGCCAGAGCTTCCAGCGCC
GCTCCAGCCTCAAGCGCCACCTGCGGATCCACGCCAGGGACAAGGACCGCCGGTCCTCCGAAGGCTCCGG
CAGCCGCCGCCGGGACTCCGACCGGAGGCCCTTCGTGTGCAGCGACTGCGGCAAGGCCTTCCGGCGCAGC
GAGCACCTGGTGGCCCACCGGAGGGTGCACACGGGCGAGCGGCCCTTCTCCTGCCAGGCTTGCGGCCGCA
GCTTCACGCAGAGCTCGCAGCTGGTCAGCCACCAACGGGTGCACACGGGCGAGAAGCCCTACGCCTGTCC
GCAGTGCGGGAAGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGGTGGCCCTCGG
CCCCACCACTGCACCCAGTGCGGGAAGAGTTTCGGCCAGACCCAGGATCTGGCCCGCCACCAGCGCAGCC
ACACGGGCGAGAAGCCCTGCCGCTGCAGCGAGTGCGGTGAGGGCTTCAGCCAGAGCGCCCACCTGGCGCG
CCACCAGCGCATCCACACAGGGGAGAAGCCCCACGCCTGCGACACCTGCGGCCACCGTTTCCGCAATAGC
TCCAACCTGGCCCGCCATCGCCGCAGCCACACGGGCGAGCGGCCCTACAGCTGTCAGACGTGCGGTCGCA
GCTTCCGGCGCAACGCGCATCTGCGGCGGCACCTGGCTACCCATGCGGAGCCCGGGCAGGAGCAGGCCGA
GCCCCCGCAGGAGTGCGTGGAGTGCGGGAAGAGCTTCAGCCGCAGCTGCAATCTGCTGCGACACCTGCTG
GTGCACACGGGCGCCAGGCCCTACTCCTGCACGCAGTGTGGCCGCAGCTTCAGCCGCAACTCCCACCTGC
TGCGCCACCTGCGCACCCACGCCCGCGAGACGCTGTACTAG

Translation (386 aa):
MRTHTDERPHACHLCGHRFRQSSHLSKHLLTHSSEPAFLCAECGRGFQRRASLVQHLLAHAQDQKPPCAP
ESKAEAPPLTDVLCSHCGQSFQRRSSLKRHLRIHARDKDRRSSEGSGSRRRDSDRRPFVCSDCGKAFRRS
EHLVAHRRVHTGERPFSCQACGRSFTQSSQLVSHQRVHTGEKPYACPQCGKRFVRRASLARHLLTHGGPR
PHHCTQCGKSFGQTQDLARHQRSHTGEKPCRCSECGEGFSQSAHLARHQRIHTGEKPHACDTCGHRFRNS
SNLARHRRSHTGERPYSCQTCGRSFRRNAHLRRHLATHAEPGQEQAEPPQECVECGKSFSRSCNLLRHLL
VHTGARPYSCTQCGRSFSRNSHLLRHLRTHARETLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH