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Report for CCDS42144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42144.1 Public Homo sapiens 16 MAZ 24 110 108 CCDS HistoryNCBI Gene:4150Re-query CCDS DB by CCDS ID:42144.1Re-query CCDS DB by GeneID:4150See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42144.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219782.11 ENSP00000219782.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000219782.11Link to Ensembl Protein Viewer:ENSP00000219782.6Re-query CCDS DB by Nucleotide ID:ENST00000219782Re-query CCDS DB by Protein ID:ENSP00000219782
Original member Current member NCBI NM_001042539.3 NP_001036004.1 Accepted alive Link to Nucleotide Sequence:NM_001042539.3Link to Protein Sequence:NP_001036004.1Re-query CCDS DB by Nucleotide ID:NM_001042539Re-query CCDS DB by Protein ID:NP_001036004Link to BLAST:NP_001036004.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036004.1 493 P56270-2 493 100% 0 0

Chromosomal Locations for CCDS 42144.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 29806702 29806893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29806978 29807828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29808230 29808293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29808570 29808741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29809540 29809742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGTTCCCGGTGTTTCCTTGCACGCTGCTGGCCCCCCCCTTCCCCGTGCTGGGCCTGGACTCCCGGGGGG
TGGGCGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCCCAGAACCCCCTGCAGGTCGGGGCTGA
GCTCCAGTCCCGCTTCTTTGCCTCCCAGGGCTGCGCCCAGAGTCCATTCCAGGCCGCGCCGGCGCCCCCG
CCCACGCCCCAGGCCCCGGCGGCCGAGCCCCTCCAGGTGGACTTGCTCCCGGTGCTCGCCGCCGCCCAGG
AGTCCGCCGCGGCTGCTGCGGCCGCTGCCGCCGCTGCTGCCGCCGTCGCTGCCGCGCCCCCGGCCCCTGC
CGCCGCCTCTACGGTGGACACAGCGGCCCTGAAGCAGCCTCCGGCGCCCCCTCCGCCACCCCCGCCAGTG
TCGGCGCCCGCGGCCGAGGCCGCGCCCCCCGCCTCCGCCGCCACTATCGCCGCGGCGGCGGCCACCGCCG
TCGTAGCCCCAACCTCGACGGTCGCCGTGGCCCCGGTCGCGTCTGCCTTGGAGAAGAAGACAAAGAGCAA
GGGGCCCTACATCTGCGCTCTGTGCGCCAAGGAGTTCAAGAACGGCTACAATCTCCGGAGGCACGAAGCC
ATCCACACGGGAGCCAAGGCCGGCCGGGTCCCCTCGGGTGCTATGAAGATGCCGACCATGGTGCCCCTGA
GCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGCGGGGGAGGGGGAGAGGCGGGTGCCGGCGGCGGCGC
TGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGACCGCCTCGGGGAAGCGCATCCGGAAGAACCATGCC
TGCGAGATGTGTGGCAAGGCCTTCCGCGACGTCTACCACCTGAACCGACACAAGCTGTCGCACTCGGACG
AGAAGCCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAGGACCGCATGAGCTACCACGTGCG
CTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAAGAGCTTCTCCCGGCCGGAT
CACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACGGCCCTTCAAATGTGAGAAATGTGAGGCAG
CTTTCGCCACGAAGGATCGGCTGCGGGCGCACACAGTACGACACGAGGAGAAAGTGCCATGTCACGTGTG
TGGCAAGATGCTGAGCTCGGCTTATATTTCGGACCACATGAAGGTGCACAGCCAGGGTCCTCACCATGTC
TGTGAGCTCTGCAACAAAGGCTTCACCACGGCAGCATACCTGCGCATCCACGCGGTGAAGGACCACGGGC
TCCAGGCCCCGCGGGCTGACCGCATCCTGTGCAAGCTGTGCAGCGTGCACTGCAAGACCCCTGCCCAGCT
GGCCGGCCACATGCAGACCCATCTGGGGGGGGCCGCCCCCCCTGTCCCGGGAGACGCCCCCCAGCCACAG
CCCACCTGCTGA

Translation (493 aa):
MFPVFPCTLLAPPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQSPFQAAPAPP
PTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPV
SAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEA
IHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHA
CEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPD
HLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHV
CELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAPPVPGDAPQPQ
PTC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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