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Report for CCDS82043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82043.1 Public Homo sapiens 17 ZNF232 24 110 108 CCDS HistoryNCBI Gene:7775Re-query CCDS DB by CCDS ID:82043.1Re-query CCDS DB by GeneID:7775See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82043.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000575898.5 ENSP00000461305.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575898.5Link to Ensembl Protein Viewer:ENSP00000461305.1Re-query CCDS DB by Nucleotide ID:ENST00000575898Re-query CCDS DB by Protein ID:ENSP00000461305
Original member Current member NCBI NM_001320952.1 NP_001307881.1 Accepted alive Link to Nucleotide Sequence:NM_001320952.1Link to Protein Sequence:NP_001307881.1Re-query CCDS DB by Nucleotide ID:NM_001320952Re-query CCDS DB by Protein ID:NP_001307881Link to BLAST:NP_001307881.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307881.1 435 Q9UNY5-2 435 100% 0 0

Chromosomal Locations for CCDS 82043.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 5105824 5106506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5108926 5109052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5109394 5109868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5111800 5111822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1308 nt):
ATGGAACCTCCTGGTCCTGTGAGGGGGCCCTTGCAAGATTCCAGCTGGTATGAGCCTTCTGCAGAGCTAG
TGCAGACTAGGATGGCTGTATCACTAACAGCAGCTGAAACTCTGGCCCTTCAGGGTACACAGGGACAAGA
GAAGATGATGATGATGGGACCAAAGGAAGAGGAACAGTCTTGTGAGTATGAGACCAGGCTACCTGGGAAC
CACTCTACCAGTCAAGAGATCTTCCGCCAACGCTTCAGGCATCTCCGCTACCAGGAGACTCCTGGTCCCC
GGGAGGCCTTGAGCCAACTACGAGTACTCTGCTGTGAGTGGCTGAGGCCAGAGAAACACACGAAGGAGCA
GATCCTGGAGTTCCTGGTGCTGGAACAATTCTTGACCATCCTGCCTGAGGAGCTCCAATCCTGGGTGCGG
GGACATCACCCTAAGAGTGGAGAGGAGGCTGTGACTGTGCTGGAGGATTTAGAGAAAGGACTTGAACCAG
AGCCGCAGGTCCCAGGCCCTGCACATGGACCTGCACAGGAAGAGCCATGGGAGAAGAAGGAATCTCTGGG
AGCAGCCCAGGAAGCACTGAGCATCCAGCTCCAGCCTAAGGAGACCCAGCCTTTCCCAAAGAGTGTTGTT
ACAGAAGATGGCCCAGAGCCCAAGGACAAAGGATCATTGCCACAACCACCCATTACTGAAGTGGAATCAC
AGGTGTTCTCAGAAAAACTTGCTACTGACACCTCTACATTTGAAGCTACCTCTGAGGGTACCTTAGAACT
GCAGCAGAGAAATCCCAAAGCGGAGAGACTGAGGTGGTCCCCTGCCCAGGAGGAAAGTTTCAGGCAGATG
GTTGTCATCCATAAGGAAATTCCCACAGGGAAGAAAGACCATGAATGTAGTGAATGTGGTAAAACCTTCA
TTTATAACTCACATCTTGTTGTCCACCAGAGAGTTCATTCTGGAGAGAAACCCTATAAGTGTAGTGACTG
TGGGAAAACTTTCAAACAGAGCTCAAACCTCGGTCAGCATCAGAGAATTCATACAGGAGAGAAACCCTTC
GAATGTAATGAATGTGGGAAGGCCTTCAGATGGGGTGCTCATCTTGTTCAGCATCAGAGGATTCACTCAG
GAGAGAAGCCCTATGAGTGTAATGAGTGTGGGAAGGCCTTTAGTCAAAGCTCATATCTAAGTCAGCATCG
GAGAATTCACAGTGGAGAGAAACCTTTTATATGTAAAGAATGTGGGAAAGCTTATGGATGGTGCTCAGAG
CTCATTAGACATCGGAGAGTTCATGCCAGAAAAGAGCCTTCCCATTGA

Translation (435 aa):
MEPPGPVRGPLQDSSWYEPSAELVQTRMAVSLTAAETLALQGTQGQEKMMMMGPKEEEQSCEYETRLPGN
HSTSQEIFRQRFRHLRYQETPGPREALSQLRVLCCEWLRPEKHTKEQILEFLVLEQFLTILPEELQSWVR
GHHPKSGEEAVTVLEDLEKGLEPEPQVPGPAHGPAQEEPWEKKESLGAAQEALSIQLQPKETQPFPKSVV
TEDGPEPKDKGSLPQPPITEVESQVFSEKLATDTSTFEATSEGTLELQQRNPKAERLRWSPAQEESFRQM
VVIHKEIPTGKKDHECSECGKTFIYNSHLVVHQRVHSGEKPYKCSDCGKTFKQSSNLGQHQRIHTGEKPF
ECNECGKAFRWGAHLVQHQRIHSGEKPYECNECGKAFSQSSYLSQHRRIHSGEKPFICKECGKAYGWCSE
LIRHRRVHARKEPSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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