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Report for CCDS11503.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
11503.2 |
Public |
Homo sapiens |
17 |
KANSL1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:284058](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:11503.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:284058](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 17 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 11503.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000262419.10 |
ENSP00000262419.6 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000262419.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000262419.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000262419](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000262419](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000432791.7 |
ENSP00000387393.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000432791.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000387393.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000432791](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000387393](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000572904.6 |
ENSP00000461484.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000572904.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000461484.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000572904](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000461484](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001193466.2 |
NP_001180395.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001193466.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001180395.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001193466](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001180395](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001180395.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001379198.1 |
NP_001366127.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001379198.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001366127.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001379198](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001366127](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001366127.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001405854.1 |
NP_001392783.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001405854.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001392783.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001405854](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001392783](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001392783.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_015443.4 |
NP_056258.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_015443.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_056258.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015443](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_056258](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_056258.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 11503.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3318 nt): ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTC CCCCATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAA CGGAACCAAAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAA GACTTGGGAAAGCTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGG AGTCTTTGAAGTTGCAAGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTC CTATGAACTCCGAGCTGAGCTGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACC ATGAATACGAGTGGTCAGACAGCTCTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAA GTTCAACACATTCTGATCATGACAATTCCACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGC TCTTCATGGGGGTGAAATGGGAGGATCTGAATCTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTT CCACATAGAAGCCTTGATGTAGAACACACAACTTTGTATAGCAATAATAGCACTGCAAACAAATCCTCTG TCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAGATTATCACCTGGTACAGACTCCAGCTCTAA CTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTTCCATTCTTTTCAGTGCTTTAGATTCT GACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGCCGTGCCCGCAGATTACAAAAGC GCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCTGGGTGGATTTTTGGAGAA GACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGCTGACTCGAAAGGCT GAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTTCTGAAAAGCA ATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGAACAGGC ATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCAGA GCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAG CTATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAAC AGACATTTACAAACAGATACGTGCTAATAAGGGGTTGATAGTTCTTGGGGAGGTACCTCCCCCAGAGCAT ACAACAGACTTATTTCTTCCACTTAGTTCTGAGGTGAAGACAGATCATGGGACTGATAAATTGATTGAGT CTGTTTCTCAGCCATTGGAAAACCATGGTGCCCCTATTATTGGTCATATTTCAGAGTCACTGTCTACCAA ATCATGTGGAGCACTCAGACCTGTCAATGGAGTTATTAACACTCTTCAGCCTGTCTTGGCAGACCACATT CCAGGTGACAGCTCTGATGCTGAGGAACAATTACATAAGAAGCAACGACTGAATCTCGTCTCTTCATCAT CTGATGGCACCTGTGTGGCAGCCCGGACACGTCCTGTACTGAGCTGTAAGAAGCGGAGGCTTGTTCGACC CAACAGCATCGTTCCTCTTTCCAAGAAGGTTCACCGGAACAGCACAATCCGCCCTGGCTGTGATGTGAAT CCCTCCTGCGCACTGTGTGGTTCAGGCAGCATCAACACCATGCCTCCCGAAATTCACTATGAAGCCCCTC TGTTGGAACGTCTTTCCCAGTTGGACTCTTGTGTTCATCCTGTTCTAGCATTTCCAGATGATGTTCCCAC AAGCCTGCATTTCCAGAGCATGCTGAAATCTCAGTGGCAGAACAAGCCTTTTGACAAAATCAAACCTCCC AAAAAGTTATCGCTTAAGCACAGAGCACCCATGCCGGGCAGTCTGCCAGATTCAGCTCGTAAGGACAGGC ACAAATTGGTCAGCTCCTTCCTAACAACAGCCAAGCTGTCCCATCACCAAACCCGGCCTGACAGGACCCA CAGGCAGCACTTAGACGATGTGGGGGCCGTGCCCATGGTGGAGCGAGTGACAGCGCCAAAAGCAGAGCGC TTGCTCAACCCACCACCACCCGTGCATGACCCAAACCACAGCAAAATGAGATTGCGAGACCATTCATCTG AGAGAAGTGAAGTGTTGAAGCATCACACAGACATGAGCAGTTCGAGCTACTTGGCAGCCACCCACCATCC TCCACACAGTCCCTTGGTGCGACAGCTCTCCACCTCCTCAGATTCCCCTGCACCCGCCAGCTCTAGCTCA CAGGTTACAGCCAGCACATCGCAGCAGCCAGTAAGGAGGAGAAGGGGAGAGAGCTCATTTGATATTAACA ACATTGTCATCCCAATGTCTGTTGCTGCAACAACTCGCGTAGAGAAACTGCAATACAAGGAAATCCTTAC GCCCAGCTGGCGGGAGGTTGATCTTCAGTCTCTGAAGGGGAGTCCTGATGAGGAGAATGAAGAGATTGAG GACCTATCCGACGCAGCCTTCGCCGCCCTGCATGCCAAATGTGAGGAGATGGAGAGGGCACGGTGGCTGT GGACCACGAGTGTGCCACCCCAGCGGCGGGGCAGCAGGTCCTACAGGTCATCAGACGGCCGGACAACCCC CCAGCTGGGCAGTGCCAACCCCTCCACCCCCCAGCCTGCCTCCCCTGATGTCAGCAGTAGCCACTCTTTG TCAGAATACTCCCATGGTCAGTCCCCTAGGAGCCCCATTAGCCCGGAACTGCACTCAGCACCCCTCACCC CTGTGGCTCGGGACACTCCGCGACACTTAGCCAGTGAGGATACCCGTTGTTCCACACCAGAGCTGGGGCT GGATGAACAGTCTGTCCAGCCCTGGGAGCGGCGGACCTTCCCCCTGGCGCACAGTCCCCAGGCGGAGTGT GAGGACCAGCTGGATGCACAGGAGCGAGCAGCCCGCTGCACTCGACGCACCTCAGGCAGCAAGACTGGCC GGGAGACAGAGGCAGCGCCCACCTCGCCTCCCATTGTCCCCCTCAAGAGTCGGCATCTGGTGGCAGCAGC CACAGCTCAGCGCCCGACTCACAGATGA
Translation (1105 aa): MAAMAPALTDAAAEAHHIRFKLAPPSSTLSPGSAENNGNANILIAANGTKRKAIAAEDPSLDFRNNPTKE DLGKLQPLVASYLCSDVTSVPSKESLKLQGVFSKQTVLKSHPLLSQSYELRAELLGRQPVLEFSLENLRT MNTSGQTALPQAPVNGLAKKLTKSSTHSDHDNSTSLNGGKRALTSSALHGGEMGGSESGDLKGGMTNCTL PHRSLDVEHTTLYSNNSTANKSSVNSMEQPALQGSSRLSPGTDSSSNLGGVKLEGKKSPLSSILFSALDS DTRITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQLGGFLEKTLSKLPNLESLRPRSQLMLTRKA EAALRKAASETTTSEGLSNFLKSNSISEELERFTASGIANLRCSEQAFDSDVTDSSSGGESDIEEEELTR ADPEQRHVPLRRRSEWKWAADRAAIVSRWNWLQAHVSDLEYRIRQQTDIYKQIRANKGLIVLGEVPPPEH TTDLFLPLSSEVKTDHGTDKLIESVSQPLENHGAPIIGHISESLSTKSCGALRPVNGVINTLQPVLADHI PGDSSDAEEQLHKKQRLNLVSSSSDGTCVAARTRPVLSCKKRRLVRPNSIVPLSKKVHRNSTIRPGCDVN PSCALCGSGSINTMPPEIHYEAPLLERLSQLDSCVHPVLAFPDDVPTSLHFQSMLKSQWQNKPFDKIKPP KKLSLKHRAPMPGSLPDSARKDRHKLVSSFLTTAKLSHHQTRPDRTHRQHLDDVGAVPMVERVTAPKAER LLNPPPPVHDPNHSKMRLRDHSSERSEVLKHHTDMSSSSYLAATHHPPHSPLVRQLSTSSDSPAPASSSS QVTASTSQQPVRRRRGESSFDINNIVIPMSVAATTRVEKLQYKEILTPSWREVDLQSLKGSPDEENEEIE DLSDAAFAALHAKCEEMERARWLWTTSVPPQRRGSRSYRSSDGRTTPQLGSANPSTPQPASPDVSSSHSL SEYSHGQSPRSPISPELHSAPLTPVARDTPRHLASEDTRCSTPELGLDEQSVQPWERRTFPLAHSPQAEC EDQLDAQERAARCTRRTSGSKTGRETEAAPTSPPIVPLKSRHLVAAATAQRPTHR
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