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Report for CCDS92359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92359.1 Public Homo sapiens 17 ANKRD40CL 24 110 108 CCDS HistoryNCBI Gene:55018Re-query CCDS DB by CCDS ID:92359.1Re-query CCDS DB by GeneID:55018See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92359.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000643007.1 ENSP00000496239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643007.1Link to Ensembl Protein Viewer:ENSP00000496239.1Re-query CCDS DB by Nucleotide ID:ENST00000643007Re-query CCDS DB by Protein ID:ENSP00000496239
Current member NCBI NM_001411123.1 NP_001398052.1 Accepted alive Link to Nucleotide Sequence:NM_001411123.1Link to Protein Sequence:NP_001398052.1Re-query CCDS DB by Nucleotide ID:NM_001411123Re-query CCDS DB by Protein ID:NP_001398052Link to BLAST:NP_001398052.1

Chromosomal Locations for CCDS 92359.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 50761363 50761506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50763397 50763557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50764165 50764248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50766874 50766913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGGCTGAACCGGAACAGGACATCGGGGAGAAGCCAGCAGGTGAATATAAACAAGAAGGCACAAATCCAC
ACTTGCCAACAACGGACCCAAGTGATAACAAGAAACCCAGTGACACCTGTCTAGTCAGAATTCAGAACCC
CAAAGAAAATGACTTCATTGAAATTGAACTGAAGAGACAAGAACTGAGTTACCAAAACCTACTAAACGTG
AGTTGCTGTGAACTGGGGATTAAACCAGAACGAGTGGAGAAGATCAGAAAGCTACCAAACACACTGCTCA
GAAAGGACAAAGACATTCGAAGACTGCGGGACTTTCAGGAAGTGGAACTCATTTTAATGAAAAATGGAAG
CTCCAGATTGACAGAATATGTGCCATCTCTGACAGAAAGGCCCTGCTATGATAGCAAAGCTGCAAAAATG
ACTTATTAA

Translation (142 aa):
MAEPEQDIGEKPAGEYKQEGTNPHLPTTDPSDNKKPSDTCLVRIQNPKENDFIEIELKRQELSYQNLLNV
SCCELGIKPERVEKIRKLPNTLLRKDKDIRRLRDFQEVELILMKNGSSRLTEYVPSLTERPCYDSKAAKM
TY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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