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Report for CCDS32720.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32720.1 Public Homo sapiens 17 CD300A 24 110 108 CCDS HistoryNCBI Gene:11314Re-query CCDS DB by CCDS ID:32720.1Re-query CCDS DB by GeneID:11314See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32720.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360141.8 ENSP00000353259.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360141.8Link to Ensembl Protein Viewer:ENSP00000353259.3Re-query CCDS DB by Nucleotide ID:ENST00000360141Re-query CCDS DB by Protein ID:ENSP00000353259
Original member Current member NCBI NM_007261.4 NP_009192.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007261.4Link to Protein Sequence:NP_009192.2Re-query CCDS DB by Nucleotide ID:NM_007261Re-query CCDS DB by Protein ID:NP_009192Link to BLAST:NP_009192.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009192.2 299 Q9UGN4-1 299 100% 0 0

Chromosomal Locations for CCDS 32720.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74466704 74466743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74473536 74473874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74474532 74474685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74477436 74477530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74481289 74481326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74481726 74481833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74484001 74484126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGTGGCTGCCTTGGGCTCTGTTGCTTCTCTGGGTCCCAGGATGTTTTGCTCTGAGCAAATGCAGGACCG
TGGCGGGCCCCGTGGGGGGATCCCTGAGTGTGCAGTGTCCCTATGAGAAGGAACACAGGACCCTCAACAA
ATACTGGTGCAGACCACCACAGATTTTCCTATGTGACAAGATTGTGGAGACCAAAGGGTCAGCAGGAAAA
AGGAACGGCCGAGTGTCCATCAGGGACAGTCCTGCAAACCTCAGCTTCACAGTGACCCTGGAGAATCTCA
CAGAGGAGGATGCAGGCACCTACTGGTGTGGGGTGGATACACCATGGCTCCGAGACTTTCATGATCCCGT
TGTCGAGGTTGAGGTGTCCGTGTTCCCGGCATCAACGTCAATGACACCTGCAAGTATCACTGCGGCCAAG
ACCTCAACAATCACAACTGCATTTCCACCTGTATCATCCACTACCCTGTTTGCAGTGGGTGCCACCCACA
GTGCCAGCATCCAGGAGGAAACTGAGGAGGTGGTGAACTCACAGCTCCCGCTGCTCCTCTCCCTGCTGGC
ATTGTTGCTGCTTCTGTTGGTGGGGGCCTCCCTGCTAGCCTGGAGGATGTTTCAGAAATGGATCAAAGCT
GGTGACCATTCAGAGCTGTCCCAGAACCCCAAGCAGGCTGCCACGCAGAGTGAGCTGCACTACGCAAATC
TGGAGCTGCTGATGTGGCCTCTGCAGGAAAAGCCAGCACCACCAAGGGAGGTGGAGGTGGAATACAGCAC
TGTGGCCTCCCCCAGGGAAGAACTTCACTATGCCTCGGTGGTGTTTGATTCTAACACCAACAGGATAGCT
GCTCAGAGGCCTCGGGAGGAGGAACCAGATTCAGATTACAGTGTGATAAGGAAGACATAG

Translation (299 aa):
MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGK
RNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVFPASTSMTPASITAAK
TSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKA
GDHSELSQNPKQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIA
AQRPREEEPDSDYSVIRKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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