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Report for CCDS82235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82235.1 Public Homo sapiens 18 AKAIN1 24 110 108 CCDS HistoryNCBI Gene:642597Re-query CCDS DB by CCDS ID:82235.1Re-query CCDS DB by GeneID:642597See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82235.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000580650.1 ENSP00000462259.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000580650.1Link to Ensembl Protein Viewer:ENSP00000462259.1Re-query CCDS DB by Nucleotide ID:ENST00000580650Re-query CCDS DB by Protein ID:ENSP00000462259
Original member Current member NCBI NM_001330553.2 NP_001317482.1 Accepted alive Link to Nucleotide Sequence:NM_001330553.2Link to Protein Sequence:NP_001317482.1Re-query CCDS DB by Nucleotide ID:NM_001330553Re-query CCDS DB by Protein ID:NP_001317482Link to BLAST:NP_001317482.1

Chromosomal Locations for CCDS 82235.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 5145562 5145755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 5197452 5197488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (231 nt):
ATGTCAGTCCAATATCCACGGCGACGAGCCACAGCAGGTGAGAAACCTGGAAATGAGCCTGAAGAGGTGA
AGCTGCAGAATGCCAGCAAACAGATTGTGCAGAATGCAATCCTGCAAGCTGTGCAGCAAGTCTCCCAGGA
GAGTCAGCGCAGAGAAGAGAGAATCAGTGACAACCGGGACCACATCCAACTGGGCGTTGGGGAGTTAACC
AAGAAGCACGAAAAGAAGTAA

Translation (76 aa):
MSVQYPRRRATAGEKPGNEPEEVKLQNASKQIVQNAILQAVQQVSQESQRREERISDNRDHIQLGVGELT
KKHEKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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