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Report for CCDS92846.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92846.1 Public Homo sapiens 2 NT5DC4 24 110 108 CCDS HistoryNCBI Gene:284958Re-query CCDS DB by CCDS ID:92846.1Re-query CCDS DB by GeneID:284958See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 92846.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000688554.1 ENSP00000509504.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000688554.1Link to Ensembl Protein Viewer:ENSP00000509504.1Re-query CCDS DB by Nucleotide ID:ENST00000688554Re-query CCDS DB by Protein ID:ENSP00000509504
Original member Current member NCBI NM_001393655.1 NP_001380584.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393655.1Link to Protein Sequence:NP_001380584.1Re-query CCDS DB by Nucleotide ID:NM_001393655Re-query CCDS DB by Protein ID:NP_001380584Link to BLAST:NP_001380584.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001380584.1 455 Q86YG4-2 455 100% 0 0

Chromosomal Locations for CCDS 92846.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 112721080 112721153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112721818 112721891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112721986 112722103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112722183 112722278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112722483 112722589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112722714 112722771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112723081 112723174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112723418 112723468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112723719 112723802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112724094 112724126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112724781 112724906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112725174 112725240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112725382 112725552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112726238 112726289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112726678 112726738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112729627 112729704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112738913 112738936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGGCCAGTGTAGACTGGAGAGAGCCGGAGGGACTGGTCTCCCCTCAAGGCCCGAAGCAGGACTGGCACC
AGCGGATTTTTGTCAACCGCAGCCTGGCGCTGGGGAAGATTCGTTGCTTTGGCTTCGACATGGACTACAC
TCTGGCTGCCTACAAGTCCCCAGCTTATGAGGCCCTGACCTTCGAGCTGCTGCTGGAGCGCCTGGTGTGC
ATTGGGTACCCGCATGAGATCCTGCGCTACACCTACGACCCCACCTTCCCCACCAGGCGGCTGGTGTTCG
ATGAACTCTATGGGAACCTGCTGAAGGTGGACGCCCACGGGAATGTGCTGCTGGGTGCCTATGGCTTCAC
CTTCCTCTCGGACCTACCCCTCCTCAGGGCAGAGATCTGGAGCTTCTACCCCAGCAAGTTCATTCAGAGG
GACGACCTGCAGTGTTTCTACATACTCAACATGCTCTTCAACCTGCCTGAAACCTACCTCTATGCCTGCT
TGGTGGACTTCTTCTCTGGCTGCTCCCGTTACACTAATTGTGACACCGGCTATCAGCATGGGAACCTCTT
CATGTCCTTCCGAAGCCTCTTCCAGGATGTGACTGATGCCATGAATAACATCCACCAGTCGGGCTGTCTC
AAGAAGACCCTGGAGGACTTGGAGAAATATGTGAAGAAGGATCCACGCCTCCCCATCCTGCTGGGGAAGA
TGAAGGAGGTTGGGAAAGTGTTTCTGGCCACCAACAGCAGCTACAACTACACCAATGCCATCATGACCTA
CCTGTTCAGCATCAGTGAGGCTGAAGCCTCGGGCAGGCCCTGGAGGTCCTACTTTGACCTGATCGTGGTG
GACACGCAGAAGCCCCACTTCTTTGCAGAGGGGTTGGTCCTGAGGCAGGTCAACACGGTAATGGCAGGTG
CAGAGGACTCAGGAAAGCTCCACGTGGGCACCTACACAGGGCCCCACCAGCACTGTGCTGTCTACTCTGG
AGGCTCTTCGGACATGGTGTGCGAGCTGCTTGGGGTTCGGGGGATGGACATCCTGTACATTGGGGACCAC
ATTTTTGGGGACATTCTCAAGTCCAAGAAGCGTCAGGGCTGGCGGACTTGCCTGGTGGTTCCTGAGCTGT
CCTGGGAGCTGGACATCTGGGCCCAGGAGAAGGAGCGGTTGGAGGAGCTGAAGAGACTGGACACGCACCT
GGCAGACATATACCAGCACATGGATGGGAGCAGTTGTGAGCTGCAAGTCATCAACTTCACCAAGAGAGAG
ATCCAGATGCCACATGAGTCAGTTGTGGAGCAAGAACAGGCCAATCTAGACCCTGCCTCCTGCCTCCTCT
CCTGCAACCAGAGGTTCATCAAGAGAAGCCACTACTAA

Translation (455 aa):
MASVDWREPEGLVSPQGPKQDWHQRIFVNRSLALGKIRCFGFDMDYTLAAYKSPAYEALTFELLLERLVC
IGYPHEILRYTYDPTFPTRRLVFDELYGNLLKVDAHGNVLLGAYGFTFLSDLPLLRAEIWSFYPSKFIQR
DDLQCFYILNMLFNLPETYLYACLVDFFSGCSRYTNCDTGYQHGNLFMSFRSLFQDVTDAMNNIHQSGCL
KKTLEDLEKYVKKDPRLPILLGKMKEVGKVFLATNSSYNYTNAIMTYLFSISEAEASGRPWRSYFDLIVV
DTQKPHFFAEGLVLRQVNTVMAGAEDSGKLHVGTYTGPHQHCAVYSGGSSDMVCELLGVRGMDILYIGDH
IFGDILKSKKRQGWRTCLVVPELSWELDIWAQEKERLEELKRLDTHLADIYQHMDGSSCELQVINFTKRE
IQMPHESVVEQEQANLDPASCLLSCNQRFIKRSHY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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