NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS13441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13441.1 Public Homo sapiens 20 ZFP64 24 110 108 CCDS HistoryNCBI Gene:55734Re-query CCDS DB by CCDS ID:13441.1Re-query CCDS DB by GeneID:55734See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13441.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000346617.8 ENSP00000344615.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000346617.8Link to Ensembl Protein Viewer:ENSP00000344615.4Re-query CCDS DB by Nucleotide ID:ENST00000346617Re-query CCDS DB by Protein ID:ENSP00000344615
Original member Current member NCBI NM_022088.5 NP_071371.3 Accepted alive Link to Nucleotide Sequence:NM_022088.5Link to Protein Sequence:NP_071371.3Re-query CCDS DB by Nucleotide ID:NM_022088Re-query CCDS DB by Protein ID:NP_071371Link to BLAST:NP_071371.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071371.3 627 Q9NTW7-6 627 100% 0 0

Chromosomal Locations for CCDS 13441.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 52152146 52153428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 52160123 52160374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 52164695 52164757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 52186832 52187071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 52191591 52191636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1884 nt):
ATGAACGCGAGCAGCGAGGGCGAGAGCTTCGCGGGCTCGGTGCAAATTCCAGGTGGCACAACGGTGCTGG
TGGAGCTGACTCCCGACATCCATATCTGCGGCATCTGCAAGCAGCAGTTTAACAACCTGGATGCCTTTGT
AGCTCACAAGCAAAGTGGCTGCCAGCTGACAGGCACATCCGCAGCAGCCCCCAGCACGGTCCAGTTTGTA
TCGGAGGAAACAGTGCCTGCCACCCAGACTCAGACCACCACCAGAACCATCACCTCGGAGACCCAGACAA
TCACAGGTTGCCAATTCAAGACTGCTTATGGCATGAAGGACATGGAGCGGCATTTAAAAATTCACACGGG
AGACAAACCCCATAAGTGTGAAGTCTGTGGCAAGTGCTTTAGCCGGAAAGACAAGCTGAAAACTCACATG
CGGTGCCACACGGGCGTGAAGCCCTACAAGTGTAAGACGTGTGACTACGCCGCTGCCGACAGCAGCAGCC
TCAACAAGCACCTGAGGATCCACTCGGACGAGCGGCCCTTCAAATGCCAGATCTGCCCCTACGCCAGCCG
CAACTCCAGCCAGCTCACTGTCCACCTGCGATCCCACACGGGGGACGCCCCCTTCCAGTGCTGGCTCTGT
AGCGCCAAGTTCAAAATCAGCTCGGACTTGAAAAGGCACATGCGGGTGCACTCGGGGGAGAAGCCTTTCA
AGTGCGAGTTCTGCAATGTCCGCTGCACCATGAAGGGGAACCTCAAGTCGCACATCCGTATCAAGCACAG
CGGGAATAACTTCAAGTGTCCTCATTGCGACTTCCTGGGTGACAGCAAAGCCACCCTCCGGAAGCACAGC
CGCGTGCACCAGTCGGAGCATCCTGAGAAGTGCTCGGAATGCAGCTACTCCTGCTCCAGCAAGGCCGCCC
TGCGCATCCACGAGCGTATCCACTGCACCGACCGCCCTTTCAAGTGCAACTACTGCAGCTTCGACACCAA
ACAGCCCAGCAACCTGAGCAAGCACATGAAGAAGTTCCATGGGGACATGGTTAAGACTGAGGCTCTAGAG
AGGAAGGACACCGGCAGGCAGAGCAGCCGGCAGGTGGCCAAGCTGGATGCCAAGAAGAGTTTCCACTGCG
ATATATGCGATGCCTCCTTCATGCGGGAGGACTCGCTCCGCAGCCACAAGAGACAGCACAGTGAGTACAG
TGAGAGTAAGAACTCGGACGTGACCGTTCTCCAGTTTCAGATCGACCCCAGCAAGCAGCCCGCCACGCCC
CTCACTGTGGGACACCTCCAGGTGCCCCTCCAGCCCAGCCAAGTGCCCCAGTTCAGCGAGGGAAGAGTCA
AAATCATCGTTGGGCATCAGGTGCCCCAGGCGAACACCATCGTCCAGGCTGCCGCCGCTGCAGTGAACAT
CGTCCCGCCTGCCTTGGTGGCCCAGAACCCAGAGGAACTCCCAGGGAACAGCCGGCTGCAGATCCTGCGC
CAGGTCAGTCTGATCGCCCCCCCTCAGTCCTCGCGGTGTCCGAGCGAGGCGGGCGCAATGACCCAGCCGG
CTGTCCTGCTGACCACCCACGAGCAGACGGACGGAGCCACTCTGCACCAGACTCTCATCCCCACGGCCTC
AGGTGGCCCCCAGGAAGGCTCTGGCAATCAAACTTTCATTACCAGTTCGGGTATTACTTGCACTGACTTT
GAAGGCCTAAACGCCTTGATTCAGGAGGGGACAGCAGAAGTGACAGTGGTGAGCGATGGAGGCCAGAACA
TCGCAGTGGCCACCACAGCGCCACCGGTCTTCTCCTCCTCTTCCCAGCAAGAACTACCCAAGCAGACCTA
CTCCATCATTCAAGGGGCAGCCCATCCAGCTTTGCTCTGTCCCGCCGACTCCATTCCAGATTAG

Translation (627 aa):
MNASSEGESFAGSVQIPGGTTVLVELTPDIHICGICKQQFNNLDAFVAHKQSGCQLTGTSAAAPSTVQFV
SEETVPATQTQTTTRTITSETQTITGCQFKTAYGMKDMERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHM
RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDAPFQCWLC
SAKFKISSDLKRHMRVHSGEKPFKCEFCNVRCTMKGNLKSHIRIKHSGNNFKCPHCDFLGDSKATLRKHS
RVHQSEHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMVKTEALE
RKDTGRQSSRQVAKLDAKKSFHCDICDASFMREDSLRSHKRQHSEYSESKNSDVTVLQFQIDPSKQPATP
LTVGHLQVPLQPSQVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVPPALVAQNPEELPGNSRLQILR
QVSLIAPPQSSRCPSEAGAMTQPAVLLTTHEQTDGATLHQTLIPTASGGPQEGSGNQTFITSSGITCTDF
EGLNALIQEGTAEVTVVSDGGQNIAVATTAPPVFSSSSQQELPKQTYSIIQGAAHPALLCPADSIPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH