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Report for CCDS13574.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13574.1 Public Homo sapiens 21 ATP5PF 24 110 108 CCDS HistoryNCBI Gene:522Re-query CCDS DB by CCDS ID:13574.1Re-query CCDS DB by GeneID:522See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13574.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284971.8 ENSP00000284971.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284971.8Link to Ensembl Protein Viewer:ENSP00000284971.3Re-query CCDS DB by Nucleotide ID:ENST00000284971Re-query CCDS DB by Protein ID:ENSP00000284971
Original member Current member EBI ENST00000400087.7 ENSP00000382959.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400087.7Link to Ensembl Protein Viewer:ENSP00000382959.3Re-query CCDS DB by Nucleotide ID:ENST00000400087Re-query CCDS DB by Protein ID:ENSP00000382959
Original member Current member EBI ENST00000400090.7 ENSP00000382962.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400090.7Link to Ensembl Protein Viewer:ENSP00000382962.3Re-query CCDS DB by Nucleotide ID:ENST00000400090Re-query CCDS DB by Protein ID:ENSP00000382962
Original member Current member EBI ENST00000400093.3 ENSP00000382965.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400093.3Link to Ensembl Protein Viewer:ENSP00000382965.3Re-query CCDS DB by Nucleotide ID:ENST00000400093Re-query CCDS DB by Protein ID:ENSP00000382965
Original member Current member EBI ENST00000400094.5 ENSP00000382966.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400094.5Link to Ensembl Protein Viewer:ENSP00000382966.1Re-query CCDS DB by Nucleotide ID:ENST00000400094Re-query CCDS DB by Protein ID:ENSP00000382966
Original member Current member NCBI NM_001003696.2 NP_001003696.1 Accepted alive Link to Nucleotide Sequence:NM_001003696.2Link to Protein Sequence:NP_001003696.1Re-query CCDS DB by Nucleotide ID:NM_001003696Re-query CCDS DB by Protein ID:NP_001003696Link to BLAST:NP_001003696.1
Original member Current member NCBI NM_001003697.2 NP_001003697.1 Accepted alive Link to Nucleotide Sequence:NM_001003697.2Link to Protein Sequence:NP_001003697.1Re-query CCDS DB by Nucleotide ID:NM_001003697Re-query CCDS DB by Protein ID:NP_001003697Link to BLAST:NP_001003697.1
Original member Current member NCBI NM_001003703.2 NP_001003703.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001003703.2Link to Protein Sequence:NP_001003703.1Re-query CCDS DB by Nucleotide ID:NM_001003703Re-query CCDS DB by Protein ID:NP_001003703Link to BLAST:NP_001003703.1
Original member Current member NCBI NM_001320266.2 NP_001307195.1 Accepted alive Link to Nucleotide Sequence:NM_001320266.2Link to Protein Sequence:NP_001307195.1Re-query CCDS DB by Nucleotide ID:NM_001320266Re-query CCDS DB by Protein ID:NP_001307195Link to BLAST:NP_001307195.1
Original member Current member NCBI NM_001320267.2 NP_001307196.1 Accepted alive Link to Nucleotide Sequence:NM_001320267.2Link to Protein Sequence:NP_001307196.1Re-query CCDS DB by Nucleotide ID:NM_001320267Re-query CCDS DB by Protein ID:NP_001307196Link to BLAST:NP_001307196.1
Original member Current member NCBI NM_001685.5 NP_001676.2 Accepted alive Link to Nucleotide Sequence:NM_001685.5Link to Protein Sequence:NP_001676.2Re-query CCDS DB by Nucleotide ID:NM_001685Re-query CCDS DB by Protein ID:NP_001676Link to BLAST:NP_001676.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003696.1 108 P18859-1 108 100% 0 0
NP_001003697.1 108 P18859-1 108 100% 0 0
NP_001003703.1 108 P18859-1 108 100% 0 0
NP_001307195.1 108 P18859-1 108 100% 0 0
NP_001307196.1 108 P18859-1 108 100% 0 0
NP_001676.2 108 P18859-1 108 100% 0 0

Chromosomal Locations for CCDS 13574.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 25724640 25724677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 25725226 25725350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 25729631 25729794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (327 nt):
ATGATTCTTCAGAGGCTCTTCAGGTTCTCCTCTGTCATTCGGTCAGCCGTCTCAGTCCATTTGCGGAGGA
ACATTGGTGTTACAGCAGTGGCATTTAATAAGGAACTTGATCCTATACAGAAACTCTTTGTGGACAAGAT
TAGAGAATACAAATCTAAGCGACAGACATCTGGAGGACCTGTTGATGCTAGTTCAGAGTATCAGCAAGAG
CTGGAGAGGGAGCTTTTTAAGCTCAAGCAAATGTTTGGTAATGCAGACATGAATACATTTCCCACCTTCA
AATTTGAAGATCCCAAATTTGAAGTCATCGAAAAACCCCAGGCCTGA

Translation (108 aa):
MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQE
LERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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