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Report for CCDS43015.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
43015.1 |
Public |
Homo sapiens |
22 |
TRIOBP |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:11078](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:43015.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:11078](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 22 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 43015.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000644935.1 |
ENSP00000496394.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000644935.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000496394.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000644935](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000496394](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001039141.3 |
NP_001034230.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001039141.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001034230.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001039141](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001034230](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001034230.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001034230.1 |
2365 |
Q9H2D6-1 |
2365 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 43015.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7098 nt): ATGGAGGAGGTGCCTGGGGATGCCCTGTGTGAACACTTTGAGGCCAACATACTTACCCAGAACCGCTGTC AAAACTGCTTCCACCCTGAGGAGGCCCATGGAGCAAGATACCAGGAGCTCAGGAGCCCTTCAGGTGCTGA GGTGCCCTACTGCGACCTGCCTCGATGTCCACCTGCCCCTGAGGACCCACTCAGCGCCTCAACCTCCGGC TGCCAGTCTGTGGTGGACCCAGGCCTCAGGCCAGGGCCCAAGAGGGGCCCATCCCCCTCAGCAGGGCTCC CAGAAGAGGGTCCCACAGCTGCCCCCAGGAGCAGGAGCCGGGAGCTTGAGGCAGTACCCTATCTGGAGGG CCTGACCACTTCCTTGTGTGGCAGCTGCAACGAGGACCCCGGCTCTGACCCCACCTCCAGCCCTGACTCC GCCACCCCTGATGATACCAGCAACTCGTCCTCTGTGGACTGGGACACTGTTGAGAGGCAGGAGGAGGAGG CCCCCAGCTGGGACGAGCTCGCAGTGATGATCCCGAGGAGGCCTCGGGAGGGGCCGAGAGCTGACAGCTC CCAAAGGGCTCCGTCTCTCCTCACCAGGTCCCCTGTGGGAGGAGATGCTGCAGGCCAGAAAAAGGAGGAC ACCGGCGGTGGGGGCCGGAGCGCAGGACAGCACTGGGCAAGGCTCCGGGGAGAAAGCGGGTTGTCCCTGG AGCGGCACCGGTCAACACTGACCCAGGCTTCCTCCATGACACCACACAGTGGACCTCGAAGCACCACGTC TCAGGCTTCTCCTGCCCAAAGGGACACTGCTCAGGCTGCCTCTACACGTGAAATCCCCAGAGCCTCCTCT CCCCATCGAATCACCCAAAGGGACACCTCCAGGGCCTCATCCACCCAACAGGAAATCTCCAGGGCCTCAT CCACCCAACAGGAAACCTCCAGGGCCTCATCCACCCAAGAGGACACCCCTAGGGCCTCATCCACCCAAGA GGACACCCCCAGGGCCTCATCTACACAGTGGAACACCCCCAGAGCTTCCTCTCCCTCACGAAGCACCCAA CTGGATAACCCCAGAACCTCTTCTACCCAGCAGGACAACCCCCAAACTTCTTTTCCTACTTGTACTCCCC AGCGGGAAAACCCCAGGACACCCTGTGTCCAGCAGGACGATCCCAGAGCCTCCTCTCCCAACAGAACCAC TCAACGAGAGAATTCCAGAACATCCTGTGCCCAGCGGGACAATCCCAAAGCCTCCAGAACCTCCTCTCCC AATAGAGCCACACGAGACAACCCCAGAACATCCTGCGCCCAGCGGGACAATCCCAGAGCCTCCTCTCCCA GTAGAGCTACACGAGACAACCCCACAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCCAGAACCTC CTCTCCCAATAGAGCCACACGAGACAACCCCAGAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCC TCTCCCAGTAGAGCTACACGAGACAACCCCACAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCCA GAACCTCCTCTCCCAATAGAGCCACACGAGACAACCCCAGAACATCCTGCGCCCAGCGGGACAATCCCAG AGCCTCCTCTCCCAATAGAGCTGCACGAGACAACCCCACAACATCCTGTGCCCAGCGGGACAATCCCAGA GCCTCCAGAACCTCCTCTCCCAATAGAGCCACACGAGACAACCCCAGAACATCCTGTGCCCAGCGGGACA ATCCCAGAGCCTCCTCTCCCAATAGAGCTACACGAGACAACCCCACAACATCCTGTGCCCAGCGGGACAA TCCCAGAGCCTCCAGAACCTCCTCTCCCAATAGAGCCACACGAGATAACCCCAGAACATCCTGTGCCCAG CGGGACAATCCCAGAGCCTCCTCTCCCAACAGAACCACCCAACAAGACAGCCCCAGAACATCCTGTGCCC GACGGGACGATCCCAGAGCCTCCTCTCCTAACAGAACCATCCAACAAGAGAACCCCAGAACATCCTGTGC CCTACGGGACAATCCCAGAGCCTCCTCTCCCAGCAGAACCATCCAACAAGAGAACCCCAGAACATCCTGT GCCCAACGGGACGATCCCAGAGCCTCCTCTCCTAACAGAACCACCCAACAAGAGAACCCCAGAACATCCT GTGCCCGACGGGACAATCCCAGAGCCTCCTCTCGCAACAGAACCATCCAGCGAGACAACCCCAGAACATC CTGTGCCCAGCGGGACAATCCCAGAGCCTCCTCTCCTAACAGAACCATCCAACAAGAGAACCTCAGAACA TCCTGTACCCGACAGGACAATCCCAGGACCTCCTCTCCCAATAGAGCCACACGAGACAACCCCAGAACAT CCTGTGCCCAGCGGGACAATCTCAGAGCCTCCTCTCCCATCAGAGCCACCCAACAGGACAACCCCAGAAC TTGTATTCAACAGAACATCCCCAGATCATCTTCTACCCAACAAGACAACCCTAAAACCTCTTGTACCAAA CGAGATAACCTCAGACCCACTTGTACACAGCGGGACCGCACACAGTCCTTTTCCTTTCAACGAGACAACC CTGGAACCTCCTCATCTCAATGCTGCACCCAAAAGGAGAATCTGAGACCATCATCTCCCCACCGCTCCAC TCAATGGAACAATCCCAGGAATTCATCTCCCCATCGTACTAACAAAGACATCCCCTGGGCCTCGTTTCCC CTCCGGCCAACTCAGAGTGATGGTCCCCGAACCTCTTCCCCATCTCGCTCCAAGCAAAGCGAGGTTCCCT GGGCATCCATCGCCCTCCGGCCAACCCAAGGTGACAGGCCTCAGACATCCTCTCCCAGCAGGCCAGCCCA GCATGACCCACCCCAGTCCTCCTTTGGCCCCACCCAGTACAACTTGCCATCCCGGGCCACCTCTTCCTCC CATAACCCAGGCCACCAGAGCACCTCCCGAACTTCCTCACCTGTGTACCCCGCTGCCTATGGGGCTCCCC TGACCTCTCCTGAGCCCTCCCAGCCTCCATGTGCTGTGTGCATTGGGCACCGGGATGCCCCTCGAGCCTC TTCGCCCCCTCGCTATTTGCAGCACGACCCCTTCCCCTTCTTCCCAGAGCCCCGCGCCCCTGAGAGTGAA CCGCCCCACCACGAGCCTCCCTATATACCACCTGCTGTGTGCATTGGACACCGAGATGCCCCCCGGGCGT CCTCGCCCCCCCGCCACACCCAATTTGACCCCTTCCCCTTCCTCCCAGACACATCAGATGCCGAGCATCA GTGTCAGTCCCCCCAACACGAGCCCCTTCAGCTCCCTGCACCTGTGTGTATTGGGTACCGAGATGCACCC CGGGCCTCCTCCCCACCACGCCAGGCCCCAGAGCCTTCCCTCTTATTCCAGGACCTCCCCAGGGCCAGCA CAGAGAGCCTTGTCCCTTCCATGGACTCTCTGCACGAGTGCCCCCACATCCCCACCCCTGTGTGCATTGG GCACCGGGATGCACCCTCCTTCTCATCCCCACCACGCCAGGCTCCTGAGCCATCCCTCTTCTTCCAGGAT CCCCCTGGAACTAGTATGGAGAGCCTGGCCCCCTCCACTGACTCTCTGCATGGCTCCCCAGTGCTGATCC CCCAAGTGTGCATCGGGCACCGGGATGCACCCCGAGCCTCCTCCCCACCCCGCCACCCACCCAGTGACCT AGCGTTCCTGGCACCCTCACCTTCACCGGGCAGCTCTGGGGGCTCCCGGGGCTCAGCGCCTCCCGGGGAG ACCAGGCACAACTTGGAGCGGGAGGAGTACACTGTGCTGGCCGACCTGCCCCCACCCAGGAGGCTGGCCC AGAGACAGCCAGGGCCCCAGGCGCAGTGCAGCAGCGGGGGCCGCACCCACAGCCCTGGCCGTGCAGAGGT GGAGCGCCTCTTCGGGCAAGAGCGCAGGAAGTCCGAGGCAGCGGGGGCCTTCCAGGCCCAGGACGAGGGA CGGTCACAGCAGCCCAGCCAAGGCCAGAGCCAACTTCTCCGAAGACAGTCCAGCCCTGCCCCCAGCAGGC AGGTGACCATGCTCCCTGCCAAACAGGCAGAACTGACCCGGCGGAGCCAAGCAGAGCCCCCTCATCCTTG GAGTCCTGAGAAGAGACCTGAGGGAGATCGGCAGCTCCAGGGGTCCCCGCTGCCCCCCAGGACATCAGCC AGGACCCCTGAGAGGGAGCTGCGGACACAGAGACCTCTGGAGAGTGGCCAAGCAGGCCCAAGACAGCCTC TGGGGGTGTGGCAGAGTCAGGAGGAACCGCCAGGGTCCCAGGGCCCTCATAGACACCTAGAAAGGAGCTG GAGCAGCCAGGAGGGAGGCCTGGGCCCTGGGGGCTGGTGGGGATGTGGAGAGCCCAGCCTGGGGGCAGCC AAAGCCCCGGAGGGAGCATGGGGGGGCACTTCCAGGGAGTACAAGGAGAGCTGGGGGCAGCCAGAGGCCT GGGAGGAGAAGCCCACTCATGAGCTCCCCAGAGAACTAGGAAAGAGAAGCCCACTCACGAGCCCCCCTGA GAACTGGGGAGGCCCCGCAGAGTCCTCACAATCCTGGCACTCTGGGACACCCACTGCTGTGGGCTGGGGG GCAGAGGGAGCGTGTCCATACCCGCGTGGCTCTGAGAGGCGACCCGAGCTTGACTGGAGGGATCTGCTTG GCCTTCTCCGGGCACCAGGAGAGGGGGTCTGGGCCCGTGTCCCCAGCCTGGACTGGGAGGGCCTCTTGGA GCTCCTGCAGGCCAGGCTGCCCCGCAAGGACCCAGCTGGACACAGGGATGACCTGGCCAGGGCTTTAGGG CCAGAGCTGGGTCCCCCAGGCACAAACGATGTCCCTGAGCAGGAGTCACACAGCCAGCCAGAAGGCTGGG CCGAGGCCACCCCAGTCAATGGACACAGCCCCGCACTGCAGTCCCAGAGCCCGGTCCAGCTGCCCAGCCC TGCCTGCACCTCCACCCAGTGGCCAAAGATCAAAGTGACAAGAGGACCAGCGACCGCAACTCTGGCAGGC CTGGAGCAGACGGGCCCCCTGGGGAGCAGGAGCACTGCGAAGGGCCCCAGCTTGCCAGAGCTGCAGTTCC AACCAGAGGAGCCTGAGGAGTCAGAACCAAGCAGAGGCCAAGACCCCCTGACTGACCAGAAGCAGGCAGA CTCGGCAGACAAGAGGCCAGCAGAGGGCAAGGCTGGGAGCCCGCTCAAGGGCCGACTGGTGACCTCATGG CGGATGCCCGGGGACCGGCCCACGCTGTTCAATCCGTTCCTGCTGTCTCTGGGGGTCCTCAGGTGGCGAA GGCCCGATCTGCTCAACTTCAAGAAGGGATGGATGTCGATCTTGGACGAGCCTGGAGAGCCTCCCTCCCC CTCGCTCACCACCACCTCTACTTCGCAGTGGAAGAAACATTGGTTTGTGCTGACAGATTCAAGTCTCAAA TATTACAGAGACTCCACTGCTGAGGAGGCAGATGAGCTGGATGGTGAGATCGACCTGCGTTCCTGCACGG ATGTCACTGAGTACGCGGTGCAGCGCAACTATGGCTTCCAGATCCACACCAAGGATGCTGTCTATACCTT GTCGGCCATGACCTCAGGCATCCGGCGGAACTGGATCGAGGCTCTGAGAAAGACCGTACGTCCAACTTCA GCCCCAGATGTCACCAAGCTCTCGGACTCTAACAAGGAGAACGCGCTGCACAGCTACAGCACCCAGAAGG GCCCCCTGAAGGCAGGGGAGCAGCGGGCGGGCTCTGAGGTCATCAGCCGGGGTGGCCCTCGGAAGGCGGA CGGGCAGCGTCAGGCCTTGGACTACGTGGAGCTCTCGCCGCTGACCCAGGCTTCCCCGCAGCGGGCCCGC ACCCCAGCCCGCACTCCTGACCGCCTGGCCAAGCAGGAGGAGCTGGAGCGGGACCTGGCCCAGCGCTCCG AGGAGCGGCGCAAGTGGTTTGAGGCCACAGACAGCAGGACCCCAGAGGTGCCTGCTGGTGAGGGGCCGCG CCGGGGCCTGGGTGCCCCCCTGACTGAGGACCAGCAAAACCGGCTTAGTGAGGAGATCGAGAAGAAGTGG CAGGAGCTGGAGAAGCTGCCCCTGCGGGAGAATAAGCGGGTGCCCCTCACTGCCCTGCTCAACCAAAGCC GCGGAGAGCGCCGAGGGCCCCCAAGTGACGGCCACGAGGCACTGGAGAAGGAGGTTCAGGCTCTTCGGGC CCAGCTGGAGGCGTGGCGTCTCCAAGGGGAGGCTCCTCAGAGTGCACTGAGATCCCAGGAGGATGGCCAC ATCCCCCCGGGCTACATCTCACAGGAGGCATGTGAGCGCAGCCTGGCAGAGATGGAGTCCTCGCACCAGC AGGTGATGGAGGAGCTGCAGCGGCACCACGAGCGGGAGCTGCAGCGCCTGCAGCAGGAGAAGGAGTGGCT CCTGGCTGAGGAGACGGCAGCCACGGCCTCAGCCATTGAAGCCATGAAGAAGGCCTACCAGGAAGAGCTG AGCCGAGAGCTGAGCAAAACACGGAGTCTCCAGCAGGGCCCGGATGGCCTCCGGAAGCAGCACCAGTCAG ATGTGGAGGCACTGAAGCGAGAGCTGCAGGTGCTATCGGAGCAGTACTCGCAGAAGTGCCTGGAGATTGG GGCACTCATGCGGCAGGCTGAGGAGCGCGAGCACACGCTGCGCCGCTGCCAGCAGGAGGGCCAGGAGCTG CTGCGCCACAACCAGGAGCTGCATGGCCGCCTGTCAGAGGAGATAGACCAGCTGCGCGGCTTCATTGCCT CGCAGGGCATGGGCAATGGCTGCGGGCGCAGCAACGAGCGGAGTTCCTGCGAGCTAGAGGTGCTGCTTCG CGTAAAAGAAAACGAACTCCAGTACCTAAAGAAGGAGGTGCAGTGCCTCCGGGACGAGCTCCAGATGATG CAGAAGGACAAGCGCTTCACCTCGGGAAAGTACCAGGACGTCTATGTGGAGCTGAGCCACATCAAGACAC GGTCTGAGCGGGAGATCGAGCAGCTGAAGGAGCACCTGCGTCTTGCCATGGCCGCCCTCCAGGAGAAGGA GTCGATGCGCAACAGCCTGGCTGAGTAG
Translation (2365 aa): MEEVPGDALCEHFEANILTQNRCQNCFHPEEAHGARYQELRSPSGAEVPYCDLPRCPPAPEDPLSASTSG CQSVVDPGLRPGPKRGPSPSAGLPEEGPTAAPRSRSRELEAVPYLEGLTTSLCGSCNEDPGSDPTSSPDS ATPDDTSNSSSVDWDTVERQEEEAPSWDELAVMIPRRPREGPRADSSQRAPSLLTRSPVGGDAAGQKKED TGGGGRSAGQHWARLRGESGLSLERHRSTLTQASSMTPHSGPRSTTSQASPAQRDTAQAASTREIPRASS PHRITQRDTSRASSTQQEISRASSTQQETSRASSTQEDTPRASSTQEDTPRASSTQWNTPRASSPSRSTQ LDNPRTSSTQQDNPQTSFPTCTPQRENPRTPCVQQDDPRASSPNRTTQRENSRTSCAQRDNPKASRTSSP NRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRAS SPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAARDNPTTSCAQRDNPR ASRTSSPNRATRDNPRTSCAQRDNPRASSPNRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQ RDNPRASSPNRTTQQDSPRTSCARRDDPRASSPNRTIQQENPRTSCALRDNPRASSPSRTIQQENPRTSC AQRDDPRASSPNRTTQQENPRTSCARRDNPRASSRNRTIQRDNPRTSCAQRDNPRASSPNRTIQQENLRT SCTRQDNPRTSSPNRATRDNPRTSCAQRDNLRASSPIRATQQDNPRTCIQQNIPRSSSTQQDNPKTSCTK RDNLRPTCTQRDRTQSFSFQRDNPGTSSSQCCTQKENLRPSSPHRSTQWNNPRNSSPHRTNKDIPWASFP LRPTQSDGPRTSSPSRSKQSEVPWASIALRPTQGDRPQTSSPSRPAQHDPPQSSFGPTQYNLPSRATSSS HNPGHQSTSRTSSPVYPAAYGAPLTSPEPSQPPCAVCIGHRDAPRASSPPRYLQHDPFPFFPEPRAPESE PPHHEPPYIPPAVCIGHRDAPRASSPPRHTQFDPFPFLPDTSDAEHQCQSPQHEPLQLPAPVCIGYRDAP RASSPPRQAPEPSLLFQDLPRASTESLVPSMDSLHECPHIPTPVCIGHRDAPSFSSPPRQAPEPSLFFQD PPGTSMESLAPSTDSLHGSPVLIPQVCIGHRDAPRASSPPRHPPSDLAFLAPSPSPGSSGGSRGSAPPGE TRHNLEREEYTVLADLPPPRRLAQRQPGPQAQCSSGGRTHSPGRAEVERLFGQERRKSEAAGAFQAQDEG RSQQPSQGQSQLLRRQSSPAPSRQVTMLPAKQAELTRRSQAEPPHPWSPEKRPEGDRQLQGSPLPPRTSA RTPERELRTQRPLESGQAGPRQPLGVWQSQEEPPGSQGPHRHLERSWSSQEGGLGPGGWWGCGEPSLGAA KAPEGAWGGTSREYKESWGQPEAWEEKPTHELPRELGKRSPLTSPPENWGGPAESSQSWHSGTPTAVGWG AEGACPYPRGSERRPELDWRDLLGLLRAPGEGVWARVPSLDWEGLLELLQARLPRKDPAGHRDDLARALG PELGPPGTNDVPEQESHSQPEGWAEATPVNGHSPALQSQSPVQLPSPACTSTQWPKIKVTRGPATATLAG LEQTGPLGSRSTAKGPSLPELQFQPEEPEESEPSRGQDPLTDQKQADSADKRPAEGKAGSPLKGRLVTSW RMPGDRPTLFNPFLLSLGVLRWRRPDLLNFKKGWMSILDEPGEPPSPSLTTTSTSQWKKHWFVLTDSSLK YYRDSTAEEADELDGEIDLRSCTDVTEYAVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEALRKTVRPTS APDVTKLSDSNKENALHSYSTQKGPLKAGEQRAGSEVISRGGPRKADGQRQALDYVELSPLTQASPQRAR TPARTPDRLAKQEELERDLAQRSEERRKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQNRLSEEIEKKW QELEKLPLRENKRVPLTALLNQSRGERRGPPSDGHEALEKEVQALRAQLEAWRLQGEAPQSALRSQEDGH IPPGYISQEACERSLAEMESSHQQVMEELQRHHERELQRLQQEKEWLLAEETAATASAIEAMKKAYQEEL SRELSKTRSLQQGPDGLRKQHQSDVEALKRELQVLSEQYSQKCLEIGALMRQAEEREHTLRRCQQEGQEL LRHNQELHGRLSEEIDQLRGFIASQGMGNGCGRSNERSSCELEVLLRVKENELQYLKKEVQCLRDELQMM QKDKRFTSGKYQDVYVELSHIKTRSEREIEQLKEHLRLAMAALQEKESMRNSLAE
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