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Report for CCDS82762.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82762.1 Public Homo sapiens 3 SACM1L 24 110 108 CCDS HistoryNCBI Gene:22908Re-query CCDS DB by CCDS ID:82762.1Re-query CCDS DB by GeneID:22908See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82762.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000418611.5 ENSP00000396387.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000418611.5Link to Ensembl Protein Viewer:ENSP00000396387.1Re-query CCDS DB by Nucleotide ID:ENST00000418611Re-query CCDS DB by Protein ID:ENSP00000396387
Original member Current member NCBI NM_001319073.2 NP_001306002.1 Accepted alive Link to Nucleotide Sequence:NM_001319073.2Link to Protein Sequence:NP_001306002.1Re-query CCDS DB by Nucleotide ID:NM_001319073Re-query CCDS DB by Protein ID:NP_001306002Link to BLAST:NP_001306002.1

Chromosomal Locations for CCDS 82762.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 45706884 45706907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45709498 45709647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45713137 45713196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45714046 45714079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45719500 45719601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45722000 45722085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45722869 45722955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45723475 45723543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45731301 45731380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45732053 45732151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45735235 45735373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45737583 45737652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45737772 45737844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45738578 45738671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45738781 45738873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45739587 45739644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45743533 45743669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGTTGCACTTAACTGATATTCAGTTACAAGATAATAAAACCTTCCTAGCGATGCTAAACCATGTCTTGA
ATGTGGATGGATTTTACTTTTCAACAACATATGATTTGACCCATACTTTGCAGCGGCTATCCAACACTAG
TCCTGAATTCCAAGAAATGAGTCTCTTGGAAAGGGCAGATCAGCGGTTTGTATGGAATGGTCATCTTCTA
AGAGAACTTTCTGCACAGCCAGAGGTTCATCGGTTTGCCCTTCCAGTGTTACATGGCTTTATTACCATGC
ATTCATGTTCTATTAATGGAAAATACTTTGATTGGATTCTCATCTCGAGGAGGAGCTGTTTCAGAGCTGG
TGTGCGCTATTATGTAAGAGGAATTGATTCGGAAGGCCATGCAGCTAACTTTGTAGAAACAGAACAAATT
GTGCACTACAATGGGAGCAAAGCTTCGTTTGTACAGACTCGAGGATCAATACCTGTTTTCTGGTCCCAAA
GACCAAACCTCAAGTACAAACCACTGCCACAGATCAGCAAAGTAGCAAATCACATGGACGGTTTCCAAAG
GCATTTTGATTCCCAAGTAATTATTTATGGAAAACAAGTTATAATCAATCTGATTAACCAGAAGGGCTCG
GAGAAGCCACTTGAGCAGACATTTGCAACAATGGTGTCTTCCTTGGGAAGTGGAATGATGAGATACATTG
CCTTTGACTTCCATAAGGAATGTAAAAATATGAGATGGGATCGACTAAGTATTTTATTGGATCAGGTAGC
AGAAATGCAAGATGAATTAAGTTATTTTCTAGTGGACTCTGCTGGCCAGGTGGTGGCAAACCAGGAAGGC
GTGTTCCGAAGCAATTGCATGGATTGTCTAGATAGAACCAATGTGATCCAGAGTTTGTTAGCTCGTCGTT
CACTTCAGGCCCAACTTCAGAGACTAGGAGTTTTGCATGTGGGACAAAAGCTTGAAGAACAAGATGAATT
TGAGAAGATTTACAAAAATGCCTGGGCTGACAACGCAAATGCTTGTGCCAAGCAATATGCGGGAACTGGT
GCCTTGAAGACTGACTTTACCAGAACTGGAAAGAGAACTCATTTGGGACTTATAATGGATGGCTGGAACT
CAATGATACGATATTATAAGAACAACTTTTCCGATGGATTTAGACAAGATTCCATAGACTTATTTCTTGG
AAACTATTCAGTGGATGAATTAGAATCTCATAGTCCTTTAAGTGTTCCAAGGGACTGGAAATTCCTGGCT
TTGCCTATTATCATGGTTGTTGCCTTTTCAATGTGCATTATCTGTTTGCTTATGGCTGGTGACACTTGGA
CAGAAACACTGGCCTATGTGCTCTTCTGGGGAGTTGCAAGCATTGGAACATTTTTTATCATTCTTTACAA
TGGCAAAGATTTTGTCGATGCTCCCAGACTGGTCCAGAAAGAAAAGATAGACTGA

Translation (484 aa):
MLHLTDIQLQDNKTFLAMLNHVLNVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERADQRFVWNGHLL
RELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQI
VHYNGSKASFVQTRGSIPVFWSQRPNLKYKPLPQISKVANHMDGFQRHFDSQVIIYGKQVIINLINQKGS
EKPLEQTFATMVSSLGSGMMRYIAFDFHKECKNMRWDRLSILLDQVAEMQDELSYFLVDSAGQVVANQEG
VFRSNCMDCLDRTNVIQSLLARRSLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTG
ALKTDFTRTGKRTHLGLIMDGWNSMIRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDWKFLA
LPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRLVQKEKID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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