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Report for CCDS33824.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33824.1 Public Homo sapiens 3 NEPRO 24 110 108 CCDS HistoryNCBI Gene:25871Re-query CCDS DB by CCDS ID:33824.1Re-query CCDS DB by GeneID:25871See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33824.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314400.10 ENSP00000320251.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314400.10Link to Ensembl Protein Viewer:ENSP00000320251.5Re-query CCDS DB by Nucleotide ID:ENST00000314400Re-query CCDS DB by Protein ID:ENSP00000320251
Original member Current member NCBI NM_015412.4 NP_056227.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015412.4Link to Protein Sequence:NP_056227.2Re-query CCDS DB by Nucleotide ID:NM_015412Re-query CCDS DB by Protein ID:NP_056227Link to BLAST:NP_056227.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056227.2 567 Q6NW34-1 567 100% 0 0

Chromosomal Locations for CCDS 33824.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 113005536 113006004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113008171 113008430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113010643 113010704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113011045 113011406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113012734 113012811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113013272 113013403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113013953 113014032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113017448 113017602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113019542 113019647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1704 nt):
ATGATGGCTGCGGTGCCGCCGGGCCTGGAGCCGTGGAACCGTGTGAGAATCCCTAAGGCGGGGAACCGCA
GCGCAGTGACAGTGCAGAACCCCGGCGCGGCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAATGCCA
TCTCGTCATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGAAACAGATGTGTTATGTGCAGTCCTTTAC
AGCAATCACAACAGAATGGGCCGCCACAAACCCCATTTGGCCCTCAAACAGGTTGAGCAATGTTTAAAGC
GTTTGAAAAACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTTGTTTTCTTCCAATGAAAATCA
GCCCTTAACTACCAAAGTATGTGTTGTCCCCAGTCAGCCAGTGGTGGAGTTGGTGTTGATGAAGGTTTTG
GGAGCCTGCAAGTTGTTGCTCCGCTTGTTGGACTGCTGCTGCAAAACTTTTCTTTTGACTGTGAAACATC
TAGGTTTGCAAGAGTTCATTATTTTAAACCTTGTGATGGTTGGGCTGGTGAGCAGGTTATGGGTTCTCTA
TAAAGGTGTCTTAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGG
ATTCAACCAATGCCTTACTTCAAAGATTTTACCTTTCCTTCTGATATCACTGAATTTTTAGGACAGCCAT
ATTTTGAAGCCTTTAAGAAAAAAATGCCTATAGCTTTTGCAGCTAAAGGAATAAATAAATTGCTAAATAA
ACTGTTTTTAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAACCTTGCTTGGAATTTCAAAAAAAGCT
AAACAAATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCA
AAGAAGAGTCATCAGAATTTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGCTACTCAGGAGAC
CAGTTTTGATTTTAAATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGA
ACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAAGAAA
TCCAGATGGCAGTTGTATGGTGCAGGAGCAAAAAACTCAAGGCTCAGGCCATTTTTCTGGGTAACAAACT
TCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAACTAGAGTGCATA
AAAACGTCTATTTGCAACCACCTTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATCATCTGAGACAGA
GAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAG
GGAAATTCAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCA
CACTGTACTGTGCATAGAACTGATCTCTACCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGC
CTGTCATACAAACTAAGGAGAAAATGATTCATGAAAATCTTAGAGGCATCCATGAAAATGAAACTGATTC
GTGGACGGTGATGCAAATAAATAAAAACAGTACATCAGGAACCATTAAGGAGACAGATGACATTGATGAT
ATTTTTGCTTTAATGGGAGTTTAG

Translation (567 aa):
MMAAVPPGLEPWNRVRIPKAGNRSAVTVQNPGAALDLCIAAVIKECHLVILSLKSQTLDAETDVLCAVLY
SNHNRMGRHKPHLALKQVEQCLKRLKNMNLEGSIQDLFELFSSNENQPLTTKVCVVPSQPVVELVLMKVL
GACKLLLRLLDCCCKTFLLTVKHLGLQEFIILNLVMVGLVSRLWVLYKGVLKRLILLYEPLFGLLQEVAR
IQPMPYFKDFTFPSDITEFLGQPYFEAFKKKMPIAFAAKGINKLLNKLFLINEQSPRASEETLLGISKKA
KQMKINVQNNVDLGQPVKNKRVFKEESSEFDVRAFCNQLKHKATQETSFDFKCSQSRLKTTKYSSQKVIG
TPHAKSFVQRFREAESFTQLSEEIQMAVVWCRSKKLKAQAIFLGNKLLKSNRLKHLEAQGTSLPKKLECI
KTSICNHLLRGSGIKTSKHHLRQRRSQNKFLRRQRKPQRKLQSTLLREIQQFSQGTRKSATDTSAKWRLS
HCTVHRTDLYPNSKQLLNSGVSMPVIQTKEKMIHENLRGIHENETDSWTVMQINKNSTSGTIKETDDIDD
IFALMGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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