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Report for CCDS47374.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47374.1 Public Homo sapiens 6 ADTRP 24 110 108 CCDS HistoryNCBI Gene:84830Re-query CCDS DB by CCDS ID:47374.1Re-query CCDS DB by GeneID:84830See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47374.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000229583.9 ENSP00000229583.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000229583.9Link to Ensembl Protein Viewer:ENSP00000229583.5Re-query CCDS DB by Nucleotide ID:ENST00000229583Re-query CCDS DB by Protein ID:ENSP00000229583
Original member Current member NCBI NM_001143948.2 NP_001137420.1 Accepted alive Link to Nucleotide Sequence:NM_001143948.2Link to Protein Sequence:NP_001137420.1Re-query CCDS DB by Nucleotide ID:NM_001143948Re-query CCDS DB by Protein ID:NP_001137420Link to BLAST:NP_001137420.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137420.1 248 Q96IZ2-2 248 100% 0 0

Chromosomal Locations for CCDS 47374.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 11714478 11714512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11723349 11723500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11735568 11735683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11766274 11766375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11768249 11768383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11770031 11770084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11778607 11778759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGACGAAGACTTCTACATGCATATACCACTTCCTTGTTCTGAGCTGGTATACTTTCCTCAATTATTACA
TCTCACAGGAAGGAAAAGACGAGGTGAAACCCAAAATCTTGGCAAATGGTGCAAGGTGGAAATATATGAC
GCTGCTTAATCTGCTCAAGAACAGGACTGCTGGGTTTGACATCTACCAGCCAGGAAGCTTTAGGCAGCTC
TTGCAGACCATTTTCTACGGGGTCACCTGCCTGGATGATGTGCTGAAAAGAACCAAAGGGGGAAAAGACA
TTAAGTTCCTAACTGCCTTCAGAGACCTGCTTTTCACCACTCTGGCTTTTCCTGTATCCACGTTTGTATT
TTTGGCATTCTGGATCCTCTTTCTCTACAATCGAGATCTCATTTACCCCAAGGTCCTAGATACTGTCATC
CCCGTGTGGCTGAATCATGCAATGCACACTTTCATATTCCCCATCACATTGGCTGAAGTCGTCCTCAGGC
CTCACTCCTATCCATCAAAGAAGACAGGACTCACCTTGCTGGCTGCTGCCAGCATTGCTTACATCAGCCG
CATCCTATGGCTCTACTTTGAGACGGGTACCTGGGTGTATCCTGTGTTTGCCAAACTCAGCCTCTTGGGT
CTAGCAGCTTTCTTCTCTCTCAGCTACGTCTTCATCGCCAGCATCTACCTACTTGGAGAGAAGCTCAACC
ACTGGAAATGGGGTGACATGAGGCAGCCACGGAAGAAGAGGAAGTAA

Translation (248 aa):
MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLLKNRTAGFDIYQPGSFRQL
LQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAFWILFLYNRDLIYPKVLDTVI
PVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAASIAYISRILWLYFETGTWVYPVFAKLSLLG
LAAFFSLSYVFIASIYLLGEKLNHWKWGDMRQPRKKRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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