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Report for CCDS94001.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94001.1 Public Homo sapiens 6 AKAP7 24 110 108 CCDS HistoryNCBI Gene:9465Re-query CCDS DB by CCDS ID:94001.1Re-query CCDS DB by GeneID:9465See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 94001.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000683794.1 ENSP00000506952.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683794.1Link to Ensembl Protein Viewer:ENSP00000506952.1Re-query CCDS DB by Nucleotide ID:ENST00000683794Re-query CCDS DB by Protein ID:ENSP00000506952
Original member Current member NCBI NM_001376570.1 NP_001363499.1 Accepted alive Link to Nucleotide Sequence:NM_001376570.1Link to Protein Sequence:NP_001363499.1Re-query CCDS DB by Nucleotide ID:NM_001376570Re-query CCDS DB by Protein ID:NP_001363499Link to BLAST:NP_001363499.1

Chromosomal Locations for CCDS 94001.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 131135764 131135782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131145285 131145416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131160059 131160198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131165081 131165217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131169113 131169273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131199461 131199573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131219661 131219808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131282399 131282604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGGAGCGCCCCGAAGCGGGAGGAATTAATTCCAATGAGTGTGAAAATGTATCAAGAAAAAAGAAAATGT
CAGAGGAATTTGAAGCCAATACTATGGATTCTCTGGTAGACATGCCATTTGCTACTGTAGATATTCAGGA
TGACTGTGGAATCACTGATGAACCTCAAATAAATTTGAAGAGAAGTCAAGAAAATGAATGGGTCAAGAGT
GATCAAGTAAAGAAGAGGAAAAAAAAGAGAAAAGATTATCAACCCAACTATTTCCTGTCCATTCCAATCA
CCAACAAAGAGATTATAAAAGGAATTAAGATCCTGCAGAATGCAATAATACAACAAGATGAGCGACTGGC
CAAAGCAATGGTCAGTGATGGTTCCTTTCATATTACCCTGCTGGTGATGCAATTATTAAATGAAGATGAA
GTAAACATTGGTATTGATGCTCTTTTGGAATTGAAACCATTCATAGAAGAACTCCTCCAGGGAAAACATT
TGACTTTGCCCTTTCAAGGGATTGGTACTTTTGGAAATCAGGTTGGATTTGTGAAGCTGGCAGAAGGAGA
TCATGTAAACTCACTTTTGGAGATAGCAGAGACTGCAAATAGGACATTTCAAGAAAAAGGCATCCTGGTA
GGAGAGAGCAGAAGTTTTAAACCTCATTTGACCTTCATGAAGTTGTCAAAATCACCGTGGCTCCGTAAGA
ATGGAGTGAAAAAAATAGATCCTGATTTATATGAAAAGTTTATCAGTCACAGATTTGGAGAAGAAATATT
ATATCGCATAGATCTTTGCTCCATGCTGAAGAAAAAACAAAGTAATGGTTATTATCACTGTGAATCTTCC
ATTGTGATTGGCAAGAAACCTATTGGAATTCGAGACTTAATTAATGAAGCTTTGCATCGAGAAACGATGG
GTCTGAAGTCCAAAGTGAAACAGATAAAGGAACTTTTATTAAAGCCTGAGACTCAGGCCAGAATTAGGAG
GGAGCTTTTTGAAGGAAGACTTATTAACAACAGTAATTCAGCAAATGACGTTGATTTCAGCACAACTTTG
ACATAA

Translation (351 aa):
MERPEAGGINSNECENVSRKKKMSEEFEANTMDSLVDMPFATVDIQDDCGITDEPQINLKRSQENEWVKS
DQVKKRKKKRKDYQPNYFLSIPITNKEIIKGIKILQNAIIQQDERLAKAMVSDGSFHITLLVMQLLNEDE
VNIGIDALLELKPFIEELLQGKHLTLPFQGIGTFGNQVGFVKLAEGDHVNSLLEIAETANRTFQEKGILV
GESRSFKPHLTFMKLSKSPWLRKNGVKKIDPDLYEKFISHRFGEEILYRIDLCSMLKKKQSNGYYHCESS
IVIGKKPIGIRDLINEALHRETMGLKSKVKQIKELLLKPETQARIRRELFEGRLINNSNSANDVDFSTTL
T


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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