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Report for CCDS87475.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87475.1 Public Homo sapiens 7 AIMP2 24 110 108 CCDS HistoryNCBI Gene:7965Re-query CCDS DB by CCDS ID:87475.1Re-query CCDS DB by GeneID:7965See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87475.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395236.2 ENSP00000378658.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395236.2Link to Ensembl Protein Viewer:ENSP00000378658.2Re-query CCDS DB by Nucleotide ID:ENST00000395236Re-query CCDS DB by Protein ID:ENSP00000378658
Original member Current member NCBI NM_001326607.2 NP_001313536.1 Accepted alive Link to Nucleotide Sequence:NM_001326607.2Link to Protein Sequence:NP_001313536.1Re-query CCDS DB by Nucleotide ID:NM_001326607Re-query CCDS DB by Protein ID:NP_001313536Link to BLAST:NP_001313536.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001313536.1 251 Q13155-2 251 100% 0 0

Chromosomal Locations for CCDS 87475.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6009364 6009498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6017814 6018045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6023303 6023691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (756 nt):
ATGCCGATGTACCAGGTAAAGCCCTATCACGGGGGCGGCGCGCCTCTCCGTGTGGAGCTTCCCACCTGCA
TGTACCGGCTCCCCAACGTGCACGGCAGGAGCTACGGCCCAGCGCCGGGCGCTGGCCACGTGCAGGATTA
CGGGGCGCTGAAAGACATCGTGATCAACGCAAACCCGGCCTCCCCTCCCCTCTCCCTGCTTGTGCTGCAC
AGGCTGCTCTGTGAGCACTTCAGGGTCCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAGCGTGCCTG
AAAACCTTCTCAAGTGCTTTGGAGAACAGAATAAAAAACAGCCCCGCCAAGACTATCAGCTGGGATTCAC
TTTAATTTGGAAGAATGTGCCGAAGACGCAGATGAAATTCAGCATCCAGACGATGTGCCCCATCGAAGGC
GAAGGGAACATTGCACGTTTCTTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCAACGCAACCCTTA
TAGATAGCTGGGTAGATATTGCGATTTTTCAGTTAAAAGAGGGAAGCAGTAAAGAAAAAGCCGCTGTTTT
CCGCTCCATGAACTCTGCTCTTGGGAAGAGCCCTTGGCTCGCTGGGAATGAACTCACCGTAGCAGACGTG
GTGCTGTGGTCTGTACTCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGA
TGAGGTCTTGTGAAAACCTGGCTCCTTTTAACACGGCCCTCAAGCTCCTTAAGTGA

Translation (251 aa):
MPMYQVKPYHGGGAPLRVELPTCMYRLPNVHGRSYGPAPGAGHVQDYGALKDIVINANPASPPLSLLVLH
RLLCEHFRVLSTVHTHSSVKSVPENLLKCFGEQNKKQPRQDYQLGFTLIWKNVPKTQMKFSIQTMCPIEG
EGNIARFLFSLFGQKHNAVNATLIDSWVDIAIFQLKEGSSKEKAAVFRSMNSALGKSPWLAGNELTVADV
VLWSVLQQIGGCSVTVPANVQRWMRSCENLAPFNTALKLLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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