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Report for CCDS34873.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34873.1 Public Homo sapiens 8 INTS9 24 110 108 CCDS HistoryNCBI Gene:55756Re-query CCDS DB by CCDS ID:34873.1Re-query CCDS DB by GeneID:55756See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34873.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000521022.6 ENSP00000429065.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000521022.6Link to Ensembl Protein Viewer:ENSP00000429065.1Re-query CCDS DB by Nucleotide ID:ENST00000521022Re-query CCDS DB by Protein ID:ENSP00000429065
Original member Current member NCBI NM_018250.4 NP_060720.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018250.4Link to Protein Sequence:NP_060720.2Re-query CCDS DB by Nucleotide ID:NM_018250Re-query CCDS DB by Protein ID:NP_060720Link to BLAST:NP_060720.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060720.2 658 Q9NV88-1 658 100% 0 0

Chromosomal Locations for CCDS 34873.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 28768146 28768322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28769889 28770026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28770982 28771080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28775759 28775926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28777829 28777953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28780823 28780994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28787829 28787889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28793807 28793987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28796544 28796655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28812327 28812461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28813492 28813612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28835292 28835378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28837637 28837776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28846747 28846809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28850213 28850273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28859436 28859563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28889874 28889882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1977 nt):
ATGAAACTGTATTGCCTGTCAGGGCACCCAACCTTACCATGCAATGTGCTCAAATTCAAATCAACCACCA
TTATGTTGGACTGCGGACTGGACATGACTTCTACCCTCAATTTCCTTCCTTTGCCACTTGTTCAAAGTCC
CAGGCTGTCCAATCTTCCTGGCTGGTCCCTGAAGGATGGAAATGCTTTCTTGGACAAGGAGCTAAAGGAG
TGCTCGGGTCATGTATTTGTGGATTCTGTGCCGGAATTCTGTTTACCAGAGACGGAGCTAATAGATCTGT
CTACAGTAGATGTGATTCTCATCTCTAACTATCACTGTATGATGGCGCTGCCATACATCACCGAGCACAC
CGGCTTCACAGGCACAGTGTATGCCACGGAACCCACCGTCCAGATCGGCAGGCTTCTCATGGAAGAGCTG
GTGAATTTCATTGAAAGAGTGCCAAAGGCTCAGTCTGCCTCCTTGTGGAAGAATAAGGACATTCAGAGGC
TGTTACCTTCTCCTCTCAAGGATGCAGTGGAAGTCTCAACCTGGAGAAGATGCTATACAATGCAAGAGGT
GAACTCTGCCCTTAGTAAAATCCAGCTGGTGGGATATTCTCAGAAAATTGAGCTTTTTGGTGCGGTCCAG
GTGACTCCTCTGAGCTCTGGCTATGCCCTTGGGAGCTCCAACTGGATCATCCAGTCTCATTACGAGAAAG
TGTCTTATGTCTCTGGATCCTCCTTGCTTACCACACACCCCCAGCCCATGGACCAAGCTTCTCTCAAAAA
CAGCGATGTTCTTGTTCTGACAGGGCTTACCCAGATCCCCACTGCAAACCCAGATGGAATGGTGGGAGAG
TTCTGCAGCAACCTAGCTCTGACAGTCCGGAATGGAGGAAACGTGTTGGTTCCCTGCTACCCTTCTGGAG
TGATCTATGACCTCCTGGAGTGCCTATATCAGTACATCGACTCAGCCGGGCTTTCCAGCGTCCCCCTCTA
CTTCATCTCCCCTGTGGCCAACAGTTCACTGGAGTTTTCCCAGATCTTTGCTGAGTGGCTTTGTCACAAC
AAACAGAGTAAGGTGTATCTTCCAGAACCACCTTTTCCTCATGCAGAGCTCATTCAGACCAATAAGCTGA
AGCACTACCCCAGCATCCACGGAGACTTCAGCAACGACTTTAGACAGCCCTGTGTGGTGTTCACCGGGCA
CCCTTCCCTCCGCTTCGGGGACGTGGTCCACTTCATGGAGCTCTGGGGAAAATCTAGTCTCAATACCGTC
ATATTCACGGAACCAGACTTCTCCTACCTGGAAGCCCTGGCTCCTTACCAGCCGCTGGCCATGAAATGCA
TCTACTGCCCCATCGACACCCGGCTGAACTTCATCCAGGTGTCAAAGCTGCTTAAAGAAGTGCAGCCCCT
GCACGTGGTGTGTCCTGAGCAGTACACTCAGCCGCCCCCAGCCCAGTCCCACAGGATGGACCTCATGATC
GACTGCCAGCCCCCCGCCATGTCCTATCGGCGGGCTGAGGTTCTCGCCCTGCCCTTCAAACGTCGGTACG
AGAAGATCGAGATCATGCCAGAGCTCGCAGATTCACTGGTGCCCATGGAGATCAAGCCTGGCATCTCCTT
GGCAACTGTCTCGGCCGTGCTGCACACCAAAGATAACAAGCACTTGCTTCAGCCCCCTCCTCGGCCCGCC
CAGCCCACGAGCGGGAAGAAGAGAAAGCGGGTGAGCGATGACGTACCAGACTGCAAAGTCCTGAAGCCTT
TGTTGAGCGGTTCCATCCCTGTGGAGCAGTTCGTGCAGACCCTGGAGAAGCATGGCTTCAGTGATATTAA
GGTGGAGGACACAGCCAAGGGCCATATCGTCCTGCTCCAGGAGGCTGAGACGCTCATCCAGATTGAAGAA
GACTCGACCCATATCATCTGCGACAATGACGAGATGCTCAGAGTGCGACTGCGGGACCTTGTCCTCAAAT
TCTTACAGAAGTTCTGA

Translation (658 aa):
MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDGNAFLDKELKE
CSGHVFVDSVPEFCLPETELIDLSTVDVILISNYHCMMALPYITEHTGFTGTVYATEPTVQIGRLLMEEL
VNFIERVPKAQSASLWKNKDIQRLLPSPLKDAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQ
VTPLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPTANPDGMVGE
FCSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHN
KQSKVYLPEPPFPHAELIQTNKLKHYPSIHGDFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTV
IFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMI
DCQPPAMSYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIKPGISLATVSAVLHTKDNKHLLQPPPRPA
QPTSGKKRKRVSDDVPDCKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHIVLLQEAETLIQIEE
DSTHIICDNDEMLRVRLRDLVLKFLQKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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