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Report for CCDS75918.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75918.1 Public Homo sapiens 9 NTMT1 24 110 108 CCDS HistoryNCBI Gene:28989Re-query CCDS DB by CCDS ID:75918.1Re-query CCDS DB by GeneID:28989See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75918.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000482347.1 ENSP00000473900.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000482347.1Link to Ensembl Protein Viewer:ENSP00000473900.1Re-query CCDS DB by Nucleotide ID:ENST00000482347Re-query CCDS DB by Protein ID:ENSP00000473900
Original member Current member EBI ENST00000617943.4 ENSP00000484447.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617943.4Link to Ensembl Protein Viewer:ENSP00000484447.1Re-query CCDS DB by Nucleotide ID:ENST00000617943Re-query CCDS DB by Protein ID:ENSP00000484447
Original member Current member NCBI NM_001286802.2 NP_001273731.1 Accepted alive Link to Nucleotide Sequence:NM_001286802.2Link to Protein Sequence:NP_001273731.1Re-query CCDS DB by Nucleotide ID:NM_001286802Re-query CCDS DB by Protein ID:NP_001273731Link to BLAST:NP_001273731.1
Original member Current member NCBI NM_001286803.2 NP_001273732.1 Accepted alive Link to Nucleotide Sequence:NM_001286803.2Link to Protein Sequence:NP_001273732.1Re-query CCDS DB by Nucleotide ID:NM_001286803Re-query CCDS DB by Protein ID:NP_001273732Link to BLAST:NP_001273732.1

Chromosomal Locations for CCDS 75918.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 129634156 129634306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129635208 129635464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (408 nt):
ATGGTCGACATAACGGAGGACTTCCTGGTTCAAGCCAAGACCTACCTGGGGGAGGAGGGCAAGAGGGTGA
GGAACTACTTCTGTTGTGGGCTCCAGGACTTCACCCCGGAGCCGGACTCTTACGACGTGATCTGGATCCA
GTGGGTGATAGGCCACCTCACCGATCAGCACCTGGCCGAGTTCCTGCGGCGCTGCAAGGGCAGCCTCCGC
CCCAACGGCATCATCGTCATCAAAGACAACATGGCCCAGGAGGGCGTGATTCTGGACGACGTGGACAGCA
GCGTGTGCCGGGACCTTGACGTGGTCCGCAGGATCATCTGCAGTGCAGGCCTCAGCCTCCTGGCCGAGGA
GAGGCAGGAGAACCTCCCCGATGAGATCTACCATGTCTATAGCTTTGCCCTGAGATGA

Translation (135 aa):
MVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLR
PNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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