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Report for CCDS69689.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69689.1 Public Homo sapiens 9 MED27 24 110 108 CCDS HistoryNCBI Gene:9442Re-query CCDS DB by CCDS ID:69689.1Re-query CCDS DB by GeneID:9442See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69689.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000474263.1 ENSP00000477136.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000474263.1Link to Ensembl Protein Viewer:ENSP00000477136.1Re-query CCDS DB by Nucleotide ID:ENST00000474263Re-query CCDS DB by Protein ID:ENSP00000477136
Original member Current member NCBI NM_001253882.2 NP_001240811.1 Accepted alive Link to Nucleotide Sequence:NM_001253882.2Link to Protein Sequence:NP_001240811.1Re-query CCDS DB by Nucleotide ID:NM_001253882Re-query CCDS DB by Protein ID:NP_001240811Link to BLAST:NP_001240811.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001240811.1 130 Q6P2C8-4 130 100% 0 0

Chromosomal Locations for CCDS 69689.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 132073698 132073742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132077442 132077586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132079642 132079844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGGCGGACGTGATAAATGTCAGTGTGAACCTGGAGGCCTTTTCCCAGGCCATTAGTGCCATCCAGGCGC
TGCGCTCCAGCGTGAGCAGGGTGTTCGACTGCCTGAAGGATGGGATGCGGAACAAGGAGACGCTGGAGGG
CCGGGAGAAGGCCTTTATTGCGCACTTCCAGGACAACTTACATTCGGTCAACCGGGACCTCAATGAGCTG
GAACGTCTGAGCAATCTGGTAGGCAAGCCATCTGAGAACCATCCTCTTCATAACAGTGGGCTGTTAAGCC
TGGATCCTGTGCAGGACAAAACTCCTCTCTATAGTCAACTCCTTCAAGCATATAAGTGGTCAAACAAGAA
AGAGCAACTTTCTATTCCAAGAATATTCCATTGGAAAGTCTGA

Translation (130 aa):
MADVINVSVNLEAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIAHFQDNLHSVNRDLNEL
ERLSNLVGKPSENHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKKEQLSIPRIFHWKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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