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Report for CCDS35431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35431.1 Public Homo sapiens X PASD1 24 110 108 CCDS HistoryNCBI Gene:139135Re-query CCDS DB by CCDS ID:35431.1Re-query CCDS DB by GeneID:139135See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35431.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370357.5 ENSP00000359382.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370357.5Link to Ensembl Protein Viewer:ENSP00000359382.4Re-query CCDS DB by Nucleotide ID:ENST00000370357Re-query CCDS DB by Protein ID:ENSP00000359382
Original member Current member NCBI NM_173493.3 NP_775764.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173493.3Link to Protein Sequence:NP_775764.2Re-query CCDS DB by Nucleotide ID:NM_173493Re-query CCDS DB by Protein ID:NP_775764Link to BLAST:NP_775764.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775764.2 773 Q8IV76-1 773 100% 0 0

Chromosomal Locations for CCDS 35431.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 151601554 151601581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151604646 151604734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151611664 151611753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151620930 151621029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151621482 151621592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151622937 151623064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151625448 151625530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151648615 151648702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151659713 151659836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151664119 151664348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151671038 151671196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151671573 151671779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151672183 151672661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151673928 151674186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151675997 151676143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2322 nt):
ATGAAGATGAGAGGGGAAAAGAGAAGAGACAAAGTCAATCCAAAAAGCTCTCAAAGGAAATTAAACTGGA
TTCCATCATTTCCTACCTATGATTACTTCAACCAAGTGACGCTACAGTTATTAGATGGCTTTATGATTAC
ACTGAGCACAGATGGAGTGATCATTTGTGTGGCTGAAAACATCTCTTCTCTTCTTGGACATTTACCAGCT
GAGATTGTGGGCAAAAAATTATTAAGCCTTCTGCCTGATGAAGAGAAAGATGAAGTCTACCAAAAGATTA
TTCTCAAATTTCCTTTACTAAACTCAGAAACACATATTGAATTTTGCTGTCATTTAAAAAGAGGAAATGT
CGAACATGGTGATAGTTCTGCTTACGAAAACGTGAAATTTATTGTGAATGTAAGAGATATTTGTAATGAG
TTTCCTGTGGTCTTTAGTGGCTTGTTTTCCAGCCACCTCTGTGCTGACTTTGCTGCATGTGTTCCTCAGG
AGGATCGGCTTTATCTTGTGGGAAATGTTTGCATTCTCAGGACTCAGCTCCTGCAGCAACTTTACACTTC
AAAGGCAGTCAGTGATGAAGCTGTACTTACACAAGATTCAGATGAGGAACCTTTTGTGGGAGAGCTCAGT
AGCTCTCAAGGTCAAAGAGGACACACTAGCATGAAAGCCGTGTACGTTGAACCCGCTGCTGCTGCTGCTG
CTGCTGCTATCTCAGACGACCAAATTGATATTGCAGAGGTTGAGCAGTATGGACCACAAGAAAACGTTCA
CATGTTTGTAGATTCTGATTCAACTTATTGCTCCAGTACAGTTTTCCTGGATACTATGCCTGAATCTCCA
GCCTTATCCTTGCAAGACTTTCGAGGTGAGCCTGAGGTGAATCCATTGTACAGGGCAGACCCAGTGGACC
TGGAGTTCTCGGTGGATCAGGTGGACTCAGTGGACCAGGAGGGCCCAATGGACCAGCAGGACCCAGAGAA
CCCAGTTGCCCCGTTGGACCAGGCAGGCCTGATGGATCCAGTGGATCCAGAGGACTCAGTGGACCTGGGG
GCTGCTGGCGCAAGTGCTCAGCCATTACAGCCATCATCACCAGTTGCATATGACATCATTAGCCAGGAAC
TGGAACTGATGAAGAAGTTGAAGGAGCAGCTAGAAGAGAGGACTTGGTTGCTGCATGATGCCATCCAAAA
CCAGCAGAATGCATTGGAATTGATGATGGATCACCTTCAGAAGCAGCCAAACACATTACGCCACGTTGTC
ATTCCTGATCTCCAATCTTCGGAGGCAGTGCCCAAGAAACAACAGAAACAACACGCTGGGCAAGTGAAGC
GGCCTCTCCCACATCCCAAGGACGTCAAGTGTTTCTGTGGTTTATCTTTATCCAACTCTCTCAAAAACAC
TGGGGAGCTTCAGGAGCCTTGTGTTGCCTTCAACCAGCAGCAACTGGTGCAGCAAGAACAACACCTGAAG
GAGCAGCAGCGGCAGCTGCGGGAGCAGCTGCAACAGCTGAGAGAGCAAAGGAAGGTGCAGAAGCAGAAGA
AGATGCAGGAGAAGAAGAAGCTGCAGGAGCAGAAAATGCAGGAGAAGAAGAAGCTGCAGGAGCAGAGGCG
GCAAAAGAAGAAGAAGCTACAGGAGCGGAAGAAGTGGCAGGGGCAGATGCTACAGAAAGAGCCAGAGGAG
GAGCAGCAGAAGCAGCAGCTGCAAGAGCAGCCACTGAAGCATAATGTCATCGTGGGGAATGAGAGGGTGC
AGATATGCCTGCAAAACCCACGTGACGTATCTGTGCCCCTCTGCAATCACCCTGTTAGATTTTTACAGGC
CCAACCCATTGTTCCTGTCCAGAGAGCAGCTGAACAACAGCCCTCTGGCTTCTATCAAGATGAAAACTGT
GGGCAACAGGAAGATGAGAGTCAAAGTTTTTATCCTGAGGCGTATCAAGGGCCCCCCGTGAACCAGCTGC
CATTGATAGATACCTCAAACTCTGAGGCAATTTCTTCTTCCAGCATTCCTCAGTTTCCCATAACTTCAGA
CTCAACCATAAGCACCCTGGAGACCCCACAGGATTACATCCGGCTTTGGCAAGAGTTGTCTGATTCACTC
GGTCCTGTTGTCCAAGTGAACACTTGGTCTTGCGATGAGCAGGGCACCCTGCACGGCCAACCCACCTACC
ATCAGGTGCAAGTTTCTGAGGTAGGAGTCGAGGGACCTCCTGATCCACAGGCTTTCCAAGGCCCTGCTGC
ATACCAGCCAGACCAGATGAGATCTGCGGAGCAGACCAGATTGATGCCTGCAGAGCAACGTGACTCAAAT
AAGCCGTGCTAA

Translation (773 aa):
MKMRGEKRRDKVNPKSSQRKLNWIPSFPTYDYFNQVTLQLLDGFMITLSTDGVIICVAENISSLLGHLPA
EIVGKKLLSLLPDEEKDEVYQKIILKFPLLNSETHIEFCCHLKRGNVEHGDSSAYENVKFIVNVRDICNE
FPVVFSGLFSSHLCADFAACVPQEDRLYLVGNVCILRTQLLQQLYTSKAVSDEAVLTQDSDEEPFVGELS
SSQGQRGHTSMKAVYVEPAAAAAAAAISDDQIDIAEVEQYGPQENVHMFVDSDSTYCSSTVFLDTMPESP
ALSLQDFRGEPEVNPLYRADPVDLEFSVDQVDSVDQEGPMDQQDPENPVAPLDQAGLMDPVDPEDSVDLG
AAGASAQPLQPSSPVAYDIISQELELMKKLKEQLEERTWLLHDAIQNQQNALELMMDHLQKQPNTLRHVV
IPDLQSSEAVPKKQQKQHAGQVKRPLPHPKDVKCFCGLSLSNSLKNTGELQEPCVAFNQQQLVQQEQHLK
EQQRQLREQLQQLREQRKVQKQKKMQEKKKLQEQKMQEKKKLQEQRRQKKKKLQERKKWQGQMLQKEPEE
EQQKQQLQEQPLKHNVIVGNERVQICLQNPRDVSVPLCNHPVRFLQAQPIVPVQRAAEQQPSGFYQDENC
GQQEDESQSFYPEAYQGPPVNQLPLIDTSNSEAISSSSIPQFPITSDSTISTLETPQDYIRLWQELSDSL
GPVVQVNTWSCDEQGTLHGQPTYHQVQVSEVGVEGPPDPQAFQGPAAYQPDQMRSAEQTRLMPAEQRDSN
KPC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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