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Report for CCDS90907.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90907.1 Public Homo sapiens 1 EIF3I 24 110 108 CCDS HistoryNCBI Gene:8668Re-query CCDS DB by CCDS ID:90907.1Re-query CCDS DB by GeneID:8668See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90907.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000678063.1 ENSP00000503706.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678063.1Link to Ensembl Protein Viewer:ENSP00000503706.1Re-query CCDS DB by Nucleotide ID:ENST00000678063Re-query CCDS DB by Protein ID:ENSP00000503706
Original member Current member NCBI NM_001394168.1 NP_001381097.1 Accepted alive Link to Nucleotide Sequence:NM_001394168.1Link to Protein Sequence:NP_001381097.1Re-query CCDS DB by Nucleotide ID:NM_001394168Re-query CCDS DB by Protein ID:NP_001381097Link to BLAST:NP_001381097.1

Chromosomal Locations for CCDS 90907.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32222442 32222444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32222538 32222630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32224034 32224121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32224410 32224475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32226171 32226320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32226403 32226530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32228499 32228609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32228727 32228816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32229135 32229208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32230927 32231019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32234424 32234549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32235011 32235305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGAAGGAGACC
TCCTCTTTACTGTGGCCAAGGACCCTATCGTCAATGTATGGTACTCTGTGAATGGTGAGAGGCTGGGCAC
CTACATGGGCCATACCGGAGCTGTGTGGTGTGTGGACGCTGACTGGGACACCAAGCATGTCCTCACTGGC
TCAGCTGACAACAGCTGTCGTCTCTGGGACTGTGAAACAGGAAAGCAGCTGGCCCTTCTCAAGACCAATT
CGGCTGTCCGGACCTGCGGTTTTGACTTTGGGGGCAACATCATCATGTTCTCCACGGACAAGCAGATGGG
CTACCAGTGCTTTGTGAGCTTTTTTGACCTGCGGGATCCGAGCCAGATTGACAACAATGAGCCCTACATG
AAGATCCCTTGCAATGACTCTAAAATCACCAGTGCTGTTTGGGGACCCCTGGGGGAGTGCATCATCGCTG
GCCATGAGAGTGGAGAGCTCAACCAGTATAGTGCCAAGTCTGGAGAGGTGTTGGTGAATGTTAAGGAGCA
CTCCCGGCAGATCAACGACATCCAGTTATCCAGGGACATGACCATGTTTGTGACCGCGTCCAAGGACAAC
ACAGCCAAGCTTTTTGACTCCACAACTCTTGAACATCAGAAGACTTTCCGGACAGAACGTCCTGTCAACT
CAGCTGCCCTCTCCCCCAACTATGACCATGTGGTCCTGGGCGGTGGTCAGGAAGCCATGGATGTAACCAC
AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTTCTTCCATTTGGCCTTTGAAGAAGAGTTTGGAAGA
GTCAAGGGTCACTTTGGACCTATCAACAGTGTTGCCTTCCATCCTGATGGCAAGAGAGGAAGGTGCCAAA
AGAGGAGGCATAGGCGTGCCCAAACAGCGCCAACAGTAGCCCTTCCCCAAACTCCAATGACAGTGGGAAC
CGGCAGCCCAGCTGCCACACGCAGTCCAGGAAGAGGAGAAAGTCAGCGGCAGCCGTCCAGCCGACTCAGC
CAGTTGTCCATGCTTTGCTCCGAGTCCCCACAGGCCTCCACCAGGCGCATGAAGCTCTCCTGCAGGGGAC
GCCCTCTGGGCGGTGGGAGTCTGGTCATCTTTTCCAGCTCAAGCCCTTGCCAAGTACAGCCAGGGAGCAA
GTGCTCAAGACCAATGAGGGAGACACAGAATCCTGTAAAGAGCCCATCTGATAAAAGGGACACAGAGCCC
TTTAGGGAGTCCAGTCTCACGGCACACACGACCCACAGAGGAGTTCCTAATCTTTGA

Translation (438 aa):
MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTG
SADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYM
KIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDN
TAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGR
VKGHFGPINSVAFHPDGKRGRCQKRRHRRAQTAPTVALPQTPMTVGTGSPAATRSPGRGESQRQPSSRLS
QLSMLCSESPQASTRRMKLSCRGRPLGGGSLVIFSSSSPCQVQPGSKCSRPMRETQNPVKSPSDKRDTEP
FRESSLTAHTTHRGVPNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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