NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45722.1 Public Homo sapiens 17 TBKBP1 24 110 108 CCDS HistoryNCBI Gene:9755Re-query CCDS DB by CCDS ID:45722.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45722.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361722.7 ENSP00000354777.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361722.7Link to Ensembl Protein Viewer:ENSP00000354777.3Re-query CCDS DB by Nucleotide ID:ENST00000361722Re-query CCDS DB by Protein ID:ENSP00000354777
Original member Current member EBI ENST00000578982.6 ENSP00000462339.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000578982.6Link to Ensembl Protein Viewer:ENSP00000462339.2Re-query CCDS DB by Nucleotide ID:ENST00000578982Re-query CCDS DB by Protein ID:ENSP00000462339
Original member Current member NCBI NM_001394755.1 NP_001381684.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394755.1Link to Protein Sequence:NP_001381684.1Re-query CCDS DB by Nucleotide ID:NM_001394755Re-query CCDS DB by Protein ID:NP_001381684Link to BLAST:NP_001381684.1
Original member Current member NCBI NM_001394756.1 NP_001381685.1 Accepted alive Link to Nucleotide Sequence:NM_001394756.1Link to Protein Sequence:NP_001381685.1Re-query CCDS DB by Nucleotide ID:NM_001394756Re-query CCDS DB by Protein ID:NP_001381685Link to BLAST:NP_001381685.1
Original member Current member NCBI NM_014726.2 NP_055541.1 Accepted alive Link to Nucleotide Sequence:NM_014726.2Link to Protein Sequence:NP_055541.1Re-query CCDS DB by Nucleotide ID:NM_014726Re-query CCDS DB by Protein ID:NP_055541Link to BLAST:NP_055541.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381684.1 615 A7MCY6-1 615 100% 0 0
NP_001381685.1 615 A7MCY6-1 615 100% 0 0
NP_055541.1 615 A7MCY6-1 615 100% 0 0

Chromosomal Locations for CCDS 45722.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 47696113 47696337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47696711 47696833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47697089 47697193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47698595 47698775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47699320 47699495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47699636 47699697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47708394 47708512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47708725 47709452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47710498 47710626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1848 nt):
ATGGAGTCCATGTTCGAGGACGACATCAGCATCCTGACGCAGGAGGCCCTGGGGCCTAGTGAGGTGTGGC
TGGACAGTCCCGGAGACCCCTCGCTTGGGGGCGACATGTGCTCCGCCTCCCACTTTGCCCTCATCACTGC
TTACGGAGACATCAAGGAACGGCTGGGGGGCCTGGAGAGGGAGAACGCCACCCTCCGACGCCGCCTCAAA
GTCTACGAGATCAAGTACCCACTGATCAGTGACTTTGGAGAGGAGCATGGCTTTTCTCTGTATGAAATCA
AGGATGGCTCCCTGCTGGAGGTGGAGAAGGTCAGCCTGCAGCAACGGCTCAACCAGTTCCAGCATGAGTT
ACAGAAGAACAAGGAGCAGGAAGAACAGCTTGGAGAGATGATCCAGGCCTACGAGAAACTCTGCGTGGAG
AAGAGTGACTTGGAGACAGAGCTGAGGGAGATGAGGGCCCTGGTGGAGACGCACCTGCGTCAGATCTGTG
GTTTGGAGCAGCAGCTGCGGCAACAGCAAGGCCTCCAGGATGCAGCCTTCTCCAACCTGAGCCCACCGCC
AGCCCCCGCCCCTCCCTGCACTGATTTAGACCTGCACTACCTGGCACTGAGAGGGGGATCTGGCTTGAGT
CATGCAGGCTGGCCGGGCTCCACACCCAGTGTGAGTGACCTGGAGCGGCGGCGGCTAGAAGAGGCTTTGG
AGGCCGCGCAGGGAGAGGCCCGGGGGGCTCAGCTCCGGGAGGAGCAGCTCCAGGCCGAGTGCGAGCGGCT
GCAGGGGGAGCTGAAGCAGCTGCAGGAGACCCGGGCCCAGGATCTGGCCTCCAACCAGTCGGAGCGAGAC
ATGGCGTGGGTGAAAAGAGTTGGGGATGATCAGGTGAATTTGGCGCTGGCCTACACCGAGCTGACGGAGG
AGCTGGGCCGGCTTCGGGAGTTGAGTTCCCTACAGGGGAGAATCTTGAGGACTCTGTTGCAGGAACAGGC
CCGGAGTGGCGGCCAGAGGCACTCGCCGCTGTCACAACGCCACTCCCCGGCCCCCCAGTGCCCCTCCCCC
TCCCCGCCTGCCCGAGCGGCTCCCCCGTGCCCCCCGTGCCAGTCCCCCGTCCCCCAGCGCCGCTCTCCCG
TGCCCCCGTGCCCCTCGCCGCAGCAGCGCCGCTCTCCGGCCTCACCCTCCTGCCCGTCGCCCGTCCCGCA
GCGCCGCTCGCCGGTGCCGCCGTCGTGCCAGTCCCCCAGCCCGCAGCGCCGTTCCCCGGTGCCCCCCAGC
TGCCCGGCCCCGCAGCCCCGGCCACCGCCGCCGCCCCCGCCGGGCGAGAGGACGCTGGCCGAGCGCGCCT
ACGCCAAGCCGCCCAGCCACCACGTGAAGGCCGGCTTCCAGGGCCGCCGCAGCTACTCTGAGCTGGCGGA
GGGCGCGGCCTACGCGGGCGCCTCCCCGCCCTGGCTGCAGGCCGAAGCGGCCACTCTCCCCAAGCCCCGG
GCCTACGGCAGCGAGCTCTACGGCCCTGGCAGGCCCCTCAGCCCGCGGCGCGCCTTCGAGGGCATCCGGC
TGCGCTTCGAGAAGCAGCCGTCGGAGGAGGACGAGTGGGCTGTGCCCACCAGCCCGCCCAGCCCGGAGGT
GGGCACCATCCGCTGCGCCTCCTTCTGCGCGGGCTTCCCCATCCCCGAGTCGCCCGCCGCCACCGCCTAC
GCCCACGCCGAGCACGCGCAGTCCTGGCCGTCCATCAACTTGCTGATGGAGACGGTGGGCTCCGACATCC
GCAGCTGCCCCCTCTGCCAGCTGGGTTTCCCTGTCGGGTACCCGGATGATGCCCTCATCAAACACATTGA
CTCCCACCTGGAGAACAGCAAGATCTAG

Translation (615 aa):
MESMFEDDISILTQEALGPSEVWLDSPGDPSLGGDMCSASHFALITAYGDIKERLGGLERENATLRRRLK
VYEIKYPLISDFGEEHGFSLYEIKDGSLLEVEKVSLQQRLNQFQHELQKNKEQEEQLGEMIQAYEKLCVE
KSDLETELREMRALVETHLRQICGLEQQLRQQQGLQDAAFSNLSPPPAPAPPCTDLDLHYLALRGGSGLS
HAGWPGSTPSVSDLERRRLEEALEAAQGEARGAQLREEQLQAECERLQGELKQLQETRAQDLASNQSERD
MAWVKRVGDDQVNLALAYTELTEELGRLRELSSLQGRILRTLLQEQARSGGQRHSPLSQRHSPAPQCPSP
SPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQRRSPVPPS
CPAPQPRPPPPPPPGERTLAERAYAKPPSHHVKAGFQGRRSYSELAEGAAYAGASPPWLQAEAATLPKPR
AYGSELYGPGRPLSPRRAFEGIRLRFEKQPSEEDEWAVPTSPPSPEVGTIRCASFCAGFPIPESPAATAY
AHAEHAQSWPSINLLMETVGSDIRSCPLCQLGFPVGYPDDALIKHIDSHLENSKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH