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Report for CCDS85257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85257.1 Public Mus musculus 7 Rasgrp4 23 108 98 CCDS HistoryNCBI Gene:233046Re-query CCDS DB by CCDS ID:85257.1Re-query CCDS DB by GeneID:233046See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85257.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032811.11 ENSMUSP00000032811.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032811.11Link to Ensembl Protein Viewer:ENSMUSP00000032811.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000032811Re-query CCDS DB by Protein ID:ENSMUSP00000032811
Original member Current member NCBI NM_145149.4 NP_660131.2 Accepted alive Link to Nucleotide Sequence:NM_145149.4Link to Protein Sequence:NP_660131.2Re-query CCDS DB by Nucleotide ID:NM_145149Re-query CCDS DB by Protein ID:NP_660131Link to BLAST:NP_660131.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660131.2 673 Q8BTM9-1 673 100% 0 0

Chromosomal Locations for CCDS 85257.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29135073 29135095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29137541 29137725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29138811 29138916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29139043 29139105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29140242 29140373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29140488 29140641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29142966 29143139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29145132 29145248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29145808 29146083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29148367 29148447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29148544 29148648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29148774 29148892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29148987 29149131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29149799 29149835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29149922 29150056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29150179 29150291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29151446 29151502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGAACCGGAAAGACATCAAAAGGAAGTCTCATCAGGAATGCTCTGGGAAGGCAGGAGGGCGGGGTCGGT
CACGTCAGGCCCGCCGCCACAAGACGTGCCCCACCCCCCGGGAAATCAGCAAGGTCATGGCGTCCATGAA
TCTGGGAGTGCTGAGTGAGAGCAGCTGCAGCGAAGATGAGCTATTGGAGGAATGTATCCGCTGCTTTGAC
TCGGCTGGCAGCCTGCGCCGAGGGGACCACATTCTCAAGATGGTGCTCACGATGCACAGCTGGGTGCTGC
CATCCTCAGAGCTCGCTGCCCGTCTGCTGACTTCGTATCAGAAGGCTGCCAAAGATGCCCAAGAGCTAAG
ACAGCTACAGATCTGTTACTTGGTCAGGTACTGGCTGACCCATCACCATGAGGCAGTGCACCAGGAACCC
CAGCTGGAAGCAGTCATAAGCCGGTTTTGGACCACTGTCGCTCAGGAGGGCAACATGGCCCAAAGGAGCC
TGGGAGATGCCTCCAGCCTGCTAAGTCCTGGAGGGCCCGGTCCCCCACCTCCCATGAGCAGCCCAGGCCT
GGGCAAGAAGCGGAAAGTGTCATTGCTATTCGATCACCTGGAGACAGAGGAGCTGGCACAACACCTCACT
TACCTGGAGTTCCGGTCTTTCCAGGCTATCACACCCCAAGACCTGCGGGGCTATGTTTTGCAGGGTTCAG
TGAGAGGTTGTCCAGCTCTGGAAGGTTCTGTGGGTCTGAGCAACAGTGTGTCCCGCTGGGTGCAGGTCAT
GGTGCTGAGTCGTCCTGGGCCTGCACAACGTGCCCAGGTCCTGGACAAATTCATTCGTGTGGCACAGAGG
CTTCACCAGCTGCAGAATTTCAACACACTGATGGCGGTCACGGGGGGTCTGTGTCATAGCGCCATCTCCA
GACTCAAGGACTCCCACGTTCATCTGAGCCCTGACAGCACAAAGGCCCTGCTGGAGCTGACAGAGCTCCT
CTCATCCCACAACAACTATGCCCACTACCGCCGCACCTGGGCCGGCTGTACTGGCTTCCGGCTGCCAGTA
CTGGGTGTGCACCTCAAGGACCTGGTATCTCTATATGAGGCTCATCCAGACAGATTGCCAGATGGCCGCC
TGCACCTACCCAAGCTGAATAGCCTCTATCTACGGCTGCAGGAGCTGATGGCGCTCCAGGGACAGCATCC
TCCCTGCAGTGCCAATGAGGACCTGCTGCACCTGCTGACGCTCTCCCTGGATCTCTTCTACACGGAAGAT
GAGATCTACGAGCTTTCTTATGCCCGGGAACCACGCTGTCCCAAGAGTCTGCCACCGTCCCCCTTCAAAG
CACCAGTGGTGGTAGAGTGGGCCCAGGGTGTGACACCAAAGCCAGACAGCGTGACTCTGGGTCAGCATGT
GGAACAGCTGGTGGAGTCCGTGTTCAAGAACTACGACCCAGAAGGCCGTGGCTCCATCTCTCTGGAGGAC
TTTGAGCGGCTGTCAGGCAACTTCCCGTTCGCCTGCCATGGGCTTCACCCACCTCCCCGCCATGGGAGTG
GCTCCTTCAGCAGAGAGGAGCTGACCAAGTACCTGCTCCATGCCAGTGCCATCTGCTCCAAGCTGGGCCT
GGCCTTCCTGCACGCCTTCCAGGAGGTCACCTTCCGAAAGCCCACGTTCTGTCACAGCTGCAGCGGCTTC
CTCTGGGGGGTCACCAAGCAAGGCTATCGCTGTCGGGACTGTGGGCTGTGTTGTCACAGACACTGCAGGG
ATCAAGTGAGAGTGGAGTGTAAGAAGAGGCCAGAGACTAAGGGTGACCCGGGCCCCCCAGGTGCACCTGT
GCCAGCCACATCACTTCCTCCTGCCAACTGTGGCTCAGAGGAAAGTCTCTCCTATACACTCTCCCCGGAT
CCGGAGTCTGGTTGCCACCTTCGCCATGCTTGGACCCAGACGGAATCCTCACACTCTTCCTGGGAGCCAG
AGGTGGTGCCCTGCCCAGCACGGGTCTTACCATCCAGAGCTTCCTCGAAGCCCAGCGTCTGA

Translation (673 aa):
MNRKDIKRKSHQECSGKAGGRGRSRQARRHKTCPTPREISKVMASMNLGVLSESSCSEDELLEECIRCFD
SAGSLRRGDHILKMVLTMHSWVLPSSELAARLLTSYQKAAKDAQELRQLQICYLVRYWLTHHHEAVHQEP
QLEAVISRFWTTVAQEGNMAQRSLGDASSLLSPGGPGPPPPMSSPGLGKKRKVSLLFDHLETEELAQHLT
YLEFRSFQAITPQDLRGYVLQGSVRGCPALEGSVGLSNSVSRWVQVMVLSRPGPAQRAQVLDKFIRVAQR
LHQLQNFNTLMAVTGGLCHSAISRLKDSHVHLSPDSTKALLELTELLSSHNNYAHYRRTWAGCTGFRLPV
LGVHLKDLVSLYEAHPDRLPDGRLHLPKLNSLYLRLQELMALQGQHPPCSANEDLLHLLTLSLDLFYTED
EIYELSYAREPRCPKSLPPSPFKAPVVVEWAQGVTPKPDSVTLGQHVEQLVESVFKNYDPEGRGSISLED
FERLSGNFPFACHGLHPPPRHGSGSFSREELTKYLLHASAICSKLGLAFLHAFQEVTFRKPTFCHSCSGF
LWGVTKQGYRCRDCGLCCHRHCRDQVRVECKKRPETKGDPGPPGAPVPATSLPPANCGSEESLSYTLSPD
PESGCHLRHAWTQTESSHSSWEPEVVPCPARVLPSRASSKPSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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