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Report for CCDS41106.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41106.1 Public Mus musculus X Zfp711 23 108 98 CCDS HistoryNCBI Gene:245595Re-query CCDS DB by CCDS ID:41106.1Re-query CCDS DB by GeneID:245595See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 41106.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113409.7 ENSMUSP00000109036.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113409.7Link to Ensembl Protein Viewer:ENSMUSP00000109036.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113409Re-query CCDS DB by Protein ID:ENSMUSP00000109036
Original member NCBI NM_177747.3 NP_808415.2 Updated not alive Link to Nucleotide Sequence:NM_177747.3Link to Protein Sequence:NP_808415.2Re-query CCDS DB by Nucleotide ID:NM_177747Re-query CCDS DB by Protein ID:NP_808415
Current member NCBI NM_177747.4 NP_808415.2 Accepted alive Link to Nucleotide Sequence:NM_177747.4Link to Protein Sequence:NP_808415.2Re-query CCDS DB by Nucleotide ID:NM_177747Re-query CCDS DB by Protein ID:NP_808415Link to BLAST:NP_808415.2

Chromosomal Locations for CCDS 41106.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 112604294 112604372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112614893 112615435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112623952 112624107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112624739 112624876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112627170 112627304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112628104 112628148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112631826 112631969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112632379 112633556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2418 nt):
ATGGAGTCAGGTGGTGGAAGTCTTGGATTGCACACTTCAGATGCTAGAATGGCTCATACCATGATTATGC
AG
GATTTTGTGGCTGGAATGGCTGGTACTGCACATATCGATGGAGACCATATTGTAGTTTCAGTTCCTGA
A
GCTGTATTAGTTTCTGATGTTGTCACAGATGATGGGATAACTCTCGATCATGGCCTTGCAGCTGAAGTT
GTC
CATGGGCCTGATATTATTACAGAGACTGATGTGGTAACAGAAGGGGTGATTGTTCCTGAAGCTGTGC
TT
GAAGCCGATGTTGCCATTGAAGAAGATTTGGAAGAAGATGATGGAGATCATATCTTAACTTCTGAGCT
T
ATTACAGAAACCGTTAGGGTACCTGAGCAGGTTTTTGTGGCTGATCTTGTTTCTGGTCCTGATGGACAT
TTG
GAACATGTGGTCCAAGATTGTGTTTCAGGTGTGGACTCTCCCACAATGGTGTCAGAAGAAGTTCTTG
TA
ACTAATTCAGATACAGAAACTGTGATTCAAGCAGGTGGTGGTGTTCCTGGTTCTACTGTTACCATAAA
A
ACGGAAGAAGATGATGATGATGATGTCAAGAGCACTTCCGAAGACTACTTAATGATATCTTTGGATGAT
GTG
GGAGAGAAGTTAGAGCATATGGGGAACACGCCATTGAAAATCGCTAGCGATGGTTCACAAGAAGATG
TT
AAAGAAGATGCATTTGGTTCAGAAGTGATAAAAGTATATATCTTTAAAGCAGAGGCTGAAGATGATGT
T
GAAATAGGTGGGACAGAAATTGTCACAGAGAGTGAATACAGCAGTGGCCATTCTGTAGCTGGAGTGCTT
GAC
CAGAGCCGAATGCAGCGAGAGAAAATGGTTTACATGGCAGTGAAAGATTCTTCCCAGGAACAGGATG
AT
ATCAGTAATGCTGATATATCAAATGAACTGTGCATGGAAGTCATTATAGGGGAAGAGGAAGGAACTCC
C
CTTGAAATTCCGCTTCAGGACTGTGATGTTAATAAAACAGGTTCCCCTGTTCTCTCTCCTGCATCATAT
G
AT
GAGAGACGAGTTTCTCGAAGGTATGAAGAATGTCAAGCACCAGGAAACACTTTTGACTCAGCATTAG
AA
AACAGAAACACTACAGCAGCACAGTACCTTCAAATTTGTGATAGCATGAACACAAATAAAGTTCTTAA
A
CAAAAAATCAAGAAGAGGAGAAGGGGAGAAACAAGGCAGTGGCAAACAGCTGTTATAATAGGTCCTGAT
GGA
CAGCCCTTGACAGTATACCCTTGCCATATTTGCACAAAAAAGTTTAAATCCAGGGGATTCTTAAAAA
GA
CACATGAAGAATCATCCCGATCATTTGATGAGAAAGAAGTACCAGTGTACAGATTGTGATTTCACAAC
T
AACAAGAAAGTGAGTTTCCATAACCACTTAGAAAGCCATAAGCTCATAAACAAGGTTGATAAAACCCAT
GAA
TTTACAGAATACACTCGAAGATACAGAGAAGCTAGTCCACTGAGTTCAAATAAACTCATTTTAAGAG
AC
AAGGAACCGAAGATGCACAAGTGCAAGTACTGTGATTACGAAACTGCCGAACAAGGACTGTTAAATAG
A
CATTTGCTGGCTGTTCATAGCAAGAGTTTTCCTCATGTTTGTGTTGAGTGTGGGAAGGGTTTTCGTCAT
CCT
TCTGAACTCAAGAAACATATGAGAACCCATACTGGTGAGAAGCCATATCAGTGTCAGTACTGTGCAT
TC
AGATGTGCAGATCAATCAAACCTGAAAACGCACATTAAGTCTAAGCATGGTAGCAACTTGCCCTATAA
A
TGTGAGCATTGTCCTCAAGCCTTTGGTGATGAGAGAGAGCTTCAGCGCCATCTGGATTTGTTTCAAGGA
CAT
AAAACACACCAATGTCCTCATTGTGATCATAAGAGCACCAACTCAAGTGACCTTAAGCGGCACATCA
TA
TCTGTCCATACCAAGGACTTTCCTCACAAATGTGAAGTCTGTGATAAAGGTTTTCATCGTCCTTCAGA
G
CTTAAAAAACATAGTGATATTCATAAGGGTAGGAAGATTCACCAGTGTAGGCATTGTGACTTTAAAACC
TCA
GATCCATTTATTCTTAGTGGTCATATCCTTTCAGTTCATACTAAAGATCAGTCATTGAAGTGTAAAA
GG
TGCAAGAGAGGATTCAGACAACAGAATGAGCTGAAAAAGCACATGAAGACTCATACTGGAAGGAAGAT
T
TACCAATGTGAATATTGTGAATACAGCACCACAGATGCATCTGGATTCAAACGACATGTGATTTCAATA
CAT
ACGAAAGACTATCCACACAGGTGTGAATTCTGCAAAAAGGGATTCCGAAGACCATCAGAAAAAAAGC
AG
CATATAATGAGGCACCACAAGGAGACTCTTATGTAG


Translation (805 aa):
MESGGGSLGLHTSDARMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEV
V
HGPDIITETDVVTEGVIVPEAVLEADVAIEEDLEEDDGDHILTSELITETVRVPEQVFVADLVSGPDGH
L
EHVVQDCVSGVDSPTMVSEEVLVTNSDTETVIQAGGGVPGSTVTIKTEEDDDDDVKSTSEDYLMIS
LDD
V
GEKLEHMGNTPLKIASDGSQEDVKEDAFGSEVIKVYIFKAEAEDDVEI
GGTEIVTESEYSSGHSVAGVL
D
QSRMQREKMVYMAVKDSSQEQDDI
SNADISNELCMEVIIGEEEGTPLEIPLQDCDVNKTGSPVLSPASY
D
ERRVSRRYEECQAPGNTFDSALENRNTTAAQYLQICDSMNTNKVLKQKIKKRRRGETRQWQTAVIIGPD
G
QPLTVYPCHICTKKFKSRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTH
E
FTEYTRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKSFPHVCVECGKGFRH
P
SELKKHMRTHTGEKPYQCQYCAFRCADQSNLKTHIKSKHGSNLPYKCEHCPQAFGDERELQRHLDLFQG
H
KTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCDKGFHRPSELKKHSDIHKGRKIHQCRHCDFKT
S
DPFILSGHILSVHTKDQSLKCKRCKRGFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISI
H
TKDYPHRCEFCKKGFRRPSEKKQHIMRHHKETLM




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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