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Report for CCDS23345.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
23345.1 |
Public |
Mus musculus |
9 |
Tmod2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:50876](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:23345.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:50876](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 9 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 23345.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000064433.10 |
ENSMUSP00000069956.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000064433.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000069956.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000064433](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000069956](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000098552.9 |
ENSMUSP00000096152.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000098552.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000096152.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000098552](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000096152](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000164100.1 |
ENSMUSP00000126739.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000164100.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000126739.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000164100](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000126739](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000215614.1 |
ENSMUSP00000150413.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000215614.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000150413.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000215614](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000150413](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000215036.1 |
ENSMUSP00000150750.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000215036.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000150750.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000215036](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000150750](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001038710.1 |
NP_001033799.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001038710.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001033799.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001038710](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001033799](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001033799.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_016711.3 |
NP_057920.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_016711.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_057920.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_016711](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_057920](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_057920.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 23345.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1056 nt): ATGGCGCTCCCCTTTCAAAAAGGGCTGGAGAAATACAAGAACATCGACGAAGACGAGCTTCTTGGCAAAC TCTCAGAAGAGGAACTGAAACAGTTGGAAAATGTTCTAGATGACCTAGATCCCGAGAGTGCAACGCTACC TGCTGGATTCCGACAGAAAGACCAGACCCAGAAAGCAGCCACTGGCCCATTTGACCGAGAACACCTGCTC ATGTACCTGGAGAAAGAGGCTTTGGAACAGAAGGACAGGGAGGACTTTGTACCCTTCACAGGAGAAAAGA AAGGGAGAGTCTTTATCCCCAAGGAAAAGCCTGTAGAAACTCGGAAAGAAGAGAAAGTGACCCTGGACCC AGAACTGGAGGAAGCCTTGGCCAGTGCCTCAGACACTGAACTCTACGACCTTGCAGCTGTCCTCGGAGTC CACAATTTGCTCAACAATCCGAAGTTTGATGAAGAGACGACCAACGGCGAAGGTCGCAAGGGGCCTGTGA GGAATGTCGTGAAAGGTGAAAAGGCCAAGCCAGTATTTGAGGAGCCACCGAACCCCACAAATGTGGAGGC AAGCCTGCAGCAGATGAAGGCCAACGACCCCAGCCTGCAGGAGGTCAACCTCAACAACATTAAGAACATT CCAATTCCAACCCTGAAGGAATTTGCAAAGTCTCTGGAGACCAACACCCATGTGAAGAAGTTCAGCCTGG CTGCAACCCGCAGCAATGACCCTGTGGCCCTTGCCTTTGCAGAGATGCTGAAAGTCAACAAGACCTTGAA AAGTCTAAACGTAGAGTCCAATTTTATCACTGGCACTGGAATCCTGGCCCTGGTGGAAGCGCTGCGGGAG AATGACACCTTGACGGAGATCAAGATTGACAACCAGAGGCAGCAGTTGGGAACAGCTGTGGAGATGGAGA TCGCCCAGATGCTGGAGGAGAACTCAAGGATCCTCAAGTTTGGGTACCAGTTTACCAAGCAAGGGCCACG GACAAGAGTGGCAGCTGCCATCACAAAAAATAATGACCTGGTTCGAAAGAAGAGAGTTGAAGGAGACAGG AGGTAA
Translation (351 aa): MALPFQKGLEKYKNIDEDELLGKLSEEELKQLENVLDDLDPESATLPAGFRQKDQTQKAATGPFDREHLL MYLEKEALEQKDREDFVPFTGEKKGRVFIPKEKPVETRKEEKVTLDPELEEALASASDTELYDLAAVLGV HNLLNNPKFDEETTNGEGRKGPVRNVVKGEKAKPVFEEPPNPTNVEASLQQMKANDPSLQEVNLNNIKNI PIPTLKEFAKSLETNTHVKKFSLAATRSNDPVALAFAEMLKVNKTLKSLNVESNFITGTGILALVEALRE NDTLTEIKIDNQRQQLGTAVEMEIAQMLEENSRILKFGYQFTKQGPRTRVAAAITKNNDLVRKKRVEGDR R
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