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Report for CCDS10355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10355.1 Public Homo sapiens 15 MESP1 24 110 108 CCDS HistoryNCBI Gene:55897Re-query CCDS DB by CCDS ID:10355.1Re-query CCDS DB by GeneID:55897See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10355.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300057.5 ENSP00000300057.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300057.5Link to Ensembl Protein Viewer:ENSP00000300057.4Re-query CCDS DB by Nucleotide ID:ENST00000300057Re-query CCDS DB by Protein ID:ENSP00000300057
Original member Current member NCBI NM_018670.4 NP_061140.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018670.4Link to Protein Sequence:NP_061140.1Re-query CCDS DB by Nucleotide ID:NM_018670Re-query CCDS DB by Protein ID:NP_061140Link to BLAST:NP_061140.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061140.1 268 Q9BRJ9 268 100% 0 0

Chromosomal Locations for CCDS 10355.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89750144 89750227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89750509 89751231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (807 nt):
ATGGCCCAGCCCCTGTGCCCGCCGCTCTCCGAGTCCTGGATGCTCTCTGCGGCCTGGGGCCCAACTCGGC
GGCCGCCGCCCTCCGACAAGGACTGCGGCCGCTCCCTCGTCTCGTCCCCAGACTCATGGGGCAGCACCCC
AGCCGACAGCCCCGTGGCGAGCCCCGCGCGGCCAGGCACCCTCCGGGACCCCCGCGCCCCCTCCGTAGGT
AGGCGCGGCGCGCGCAGCAGCCGCCTGGGCAGCGGGCAGAGGCAGAGCGCCAGTGAGCGGGAGAAACTGC
GCATGCGCACGCTGGCCCGCGCCCTGCACGAGCTGCGCCGCTTTCTACCGCCGTCCGTGGCGCCCGCGGG
CCAGAGCCTGACCAAGATCGAGACGCTGCGCCTGGCTATCCGCTATATCGGCCACCTGTCGGCCGTGCTA
GGCCTCAGCGAGGAGAGTCTCCAGCGCCGGTGCCGGCAGCGCGGTGACGCGGGGTCCCCTCGGGGCTGCC
CGCTGTGCCCCGACGACTGCCCCGCGCAGATGCAGACACGGACGCAGGCTGAGGGGCAGGGGCAGGGGCG
CGGGCTGGGCCTGGTATCCGCCGTCCGCGCCGGGGCGTCCTGGGGATCCCCGCCTGCCTGCCCCGGAGCC
CGAGCTGCACCCGAGCCGCGCGACCCGCCTGCGCTGTTCGCCGAGGCGGCGTGCCCTGAAGGGCAGGCGA
TGGAGCCAAGCCCACCGTCCCCGCTCCTTCCGGGCGACGTGCTGGCTCTGTTGGAGACCTGGATGCCCCT
CTCGCCTCTGGAGTGGCTGCCTGAGGAGCCCAAGTGA

Translation (268 aa):
MAQPLCPPLSESWMLSAAWGPTRRPPPSDKDCGRSLVSSPDSWGSTPADSPVASPARPGTLRDPRAPSVG
RRGARSSRLGSGQRQSASEREKLRMRTLARALHELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSAVL
GLSEESLQRRCRQRGDAGSPRGCPLCPDDCPAQMQTRTQAEGQGQGRGLGLVSAVRAGASWGSPPACPGA
RAAPEPRDPPALFAEAACPEGQAMEPSPPSPLLPGDVLALLETWMPLSPLEWLPEEPK


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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