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Report for CCDS7161.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
7161.1 |
Public |
Homo sapiens |
10 |
WAC |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:51322](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:7161.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:51322](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 10 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 7161.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000375664.8 |
ENSP00000364816.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000375664.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000364816.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000375664](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000364816](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000442148.6 |
ENSP00000400848.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000442148.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000400848.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000442148](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000400848](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000679428.1 |
ENSP00000506445.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000679428.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000506445.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000679428](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000506445](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000679398.1 |
ENSP00000506624.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000679398.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000506624.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000679398](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000506624](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_100264.3 |
NP_567822.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_100264.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_567822.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_100264](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_567822](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_567822.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_567822.1 |
602 |
Q9BTA9-2 |
602 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 7161.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1809 nt): ATGCGAGACGCCGGAGATCCTTCACCACCAAATAAAATGTTGCGGAGATCTGATAGTCCTGAAAACAAAT ACAGTGACAGCACAGGTCACAGTAAGGCCAAAAATGTGCATACTCACAGAGTTAGAGAGAGGGATGGTGG GACCAGTTACTCTCCACAAGAAAATTCACACAACCACAGTGCTCTTCATAGTTCAAATTCACATTCTTCT AATCCAAGCAATAACCCAAGCAAAACTTCAGATGCACCTTATGATTCTGCAGATGACTGGTCTGAGCATA TTAGCTCTTCTGGGAAAAAGTACTACTACAATTGTCGAACAGAAGTTTCACAATGGGAAAAACCAAAAGA GTGGCTTGAAAGAGAACAGAGACAAAAAGAAGCAAACAAGATGGCAGTCAACAGCTTCCCAAAAGATAGG GATTACAGAAGAGAGGTGATGCAAGCAACAGCCACTAGTGGGTTTGCCAGTGGAATGGAAGACAAGCATT CCAGTGATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAAACAAGCAGACACAATGACAGAGACTA CAGACTGCCAAGAGCAGAGACTCACAGTAGTTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCAT CCAACTGCTACCCCAAGCACTGTTCCTTCTAGTCCATTTACGCTACAGTCTGATCACCAGCCAAAGAAAT CATTTGATGCTAATGGAGCATCTACTTTATCAAAACTGCCTACACCCACATCTTCTGTCCCTGCACAGAA AACAGAAAGAAAAGAATCTACATCAGGAGACAAACCCGTATCACATTCTTGCACAACTCCTTCCACGTCT TCTGCCTCTGGACTGAACCCCACATCTGCACCTCCAACATCTGCTTCAGCGGTCCCTGTTTCTCCTGTTC CACAGTCGCCAATACCTCCCTTACTTCAGGACCCAAATCTTCTTAGACAATTGCTTCCTGCTTTGCAAGC CACGCTGCAGCTTAATAATTCTAATGTGGACATATCTAAAATAAATGAAGTTCTTACAGCAGCTGTGACA CAAGCCTCACTGCAGTCTATAATTCATAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATAACGTCTC TGATTTCTCAAGCTGCTCAGCTCTCTACACAAGCCCAGCCATCTAATCAGTCTCCGATGTCTTTAACATC TGATGCGTCATCCCCAAGATCATATGTTTCTCCAAGAATAAGCACACCTCAAACTAACACAGTCCCTATC AAACCTTTGATCAGTACTCCTCCTGTTTCATCACAGCCAAAGGTTAGTACTCCAGTAGTTAAGCAAGGAC CAGTGTCACAGTCAGCCACACAGCAGCCTGTAACTGCTGACAAGCAGCAAGGTCATGAACCTGTCTCTCC TCGAAGTCTTCAGCGCTCAAGTAGCCAGAGAAGTCCATCACCTGGTCCCAATCATACTTCTAATAGTAGT AATGCATCAAATGCAACAGTTGTACCACAGAATTCTTCTGCCCGATCCACGTGTTCATTAACGCCTGCAC TAGCAGCACACTTCAGTGAAAATCTCATAAAACACGTTCAAGGATGGCCTGCAGATCATGCAGAGAAGCA GGCATCAAGATTACGCGAAGAAGCGCATAACATGGGAACTATTCACATGTCCGAAATTTGTACTGAATTA AAAAATTTAAGATCTTTAGTCCGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAAAGGATACTATTTT TGAGACAACAAATTAAGGAACTTGAAAAGCTAAAAAATCAGAATTCCTTCATGGTGTGA
Translation (602 aa): MRDAGDPSPPNKMLRRSDSPENKYSDSTGHSKAKNVHTHRVRERDGGTSYSPQENSHNHSALHSSNSHSS NPSNNPSKTSDAPYDSADDWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNSFPKDR DYRREVMQATATSGFASGMEDKHSSDASSLLPQNILSQTSRHNDRDYRLPRAETHSSSTPVQHPIKPVVH PTATPSTVPSSPFTLQSDHQPKKSFDANGASTLSKLPTPTSSVPAQKTERKESTSGDKPVSHSCTTPSTS SASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKINEVLTAAVT QASLQSIIHKFLTAGPSAFNITSLISQAAQLSTQAQPSNQSPMSLTSDASSPRSYVSPRISTPQTNTVPI KPLISTPPVSSQPKVSTPVVKQGPVSQSATQQPVTADKQQGHEPVSPRSLQRSSSQRSPSPGPNHTSNSS NASNATVVPQNSSARSTCSLTPALAAHFSENLIKHVQGWPADHAEKQASRLREEAHNMGTIHMSEICTEL KNLRSLVRVCEIQATLREQRILFLRQQIKELEKLKNQNSFMV
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