NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS34673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34673.1 Public Homo sapiens 7 CD36 24 110 108 CCDS HistoryNCBI Gene:948Re-query CCDS DB by CCDS ID:34673.1Re-query CCDS DB by GeneID:948See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34673.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309881.11 ENSP00000308165.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000309881.11Link to Ensembl Protein Viewer:ENSP00000308165.7Re-query CCDS DB by Nucleotide ID:ENST00000309881Re-query CCDS DB by Protein ID:ENSP00000308165
Original member Current member EBI ENST00000394788.7 ENSP00000378268.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394788.7Link to Ensembl Protein Viewer:ENSP00000378268.3Re-query CCDS DB by Nucleotide ID:ENST00000394788Re-query CCDS DB by Protein ID:ENSP00000378268
Original member Current member EBI ENST00000435819.5 ENSP00000399421.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435819.5Link to Ensembl Protein Viewer:ENSP00000399421.1Re-query CCDS DB by Nucleotide ID:ENST00000435819Re-query CCDS DB by Protein ID:ENSP00000399421
Original member Current member EBI ENST00000432207.5 ENSP00000411411.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432207.5Link to Ensembl Protein Viewer:ENSP00000411411.1Re-query CCDS DB by Nucleotide ID:ENST00000432207Re-query CCDS DB by Protein ID:ENSP00000411411
Original member Current member EBI ENST00000447544.7 ENSP00000415743.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000447544.7Link to Ensembl Protein Viewer:ENSP00000415743.2Re-query CCDS DB by Nucleotide ID:ENST00000447544Re-query CCDS DB by Protein ID:ENSP00000415743
Original member Current member NCBI NM_000072.3 NP_000063.2 Accepted alive Link to Nucleotide Sequence:NM_000072.3Link to Protein Sequence:NP_000063.2Re-query CCDS DB by Nucleotide ID:NM_000072Re-query CCDS DB by Protein ID:NP_000063Link to BLAST:NP_000063.2
Original member Current member NCBI NM_001001547.3 NP_001001547.1 Accepted alive Link to Nucleotide Sequence:NM_001001547.3Link to Protein Sequence:NP_001001547.1Re-query CCDS DB by Nucleotide ID:NM_001001547Re-query CCDS DB by Protein ID:NP_001001547Link to BLAST:NP_001001547.1
Original member Current member NCBI NM_001001548.3 NP_001001548.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001548.3Link to Protein Sequence:NP_001001548.1Re-query CCDS DB by Nucleotide ID:NM_001001548Re-query CCDS DB by Protein ID:NP_001001548Link to BLAST:NP_001001548.1
Original member Current member NCBI NM_001127443.2 NP_001120915.1 Accepted alive Link to Nucleotide Sequence:NM_001127443.2Link to Protein Sequence:NP_001120915.1Re-query CCDS DB by Nucleotide ID:NM_001127443Re-query CCDS DB by Protein ID:NP_001120915Link to BLAST:NP_001120915.1
Original member Current member NCBI NM_001127444.2 NP_001120916.1 Accepted alive Link to Nucleotide Sequence:NM_001127444.2Link to Protein Sequence:NP_001120916.1Re-query CCDS DB by Nucleotide ID:NM_001127444Re-query CCDS DB by Protein ID:NP_001120916Link to BLAST:NP_001120916.1
Original member Current member NCBI NM_001371074.1 NP_001358003.1 Accepted alive Link to Nucleotide Sequence:NM_001371074.1Link to Protein Sequence:NP_001358003.1Re-query CCDS DB by Nucleotide ID:NM_001371074Re-query CCDS DB by Protein ID:NP_001358003Link to BLAST:NP_001358003.1
Original member Current member NCBI NM_001371075.1 NP_001358004.1 Accepted alive Link to Nucleotide Sequence:NM_001371075.1Link to Protein Sequence:NP_001358004.1Re-query CCDS DB by Nucleotide ID:NM_001371075Re-query CCDS DB by Protein ID:NP_001358004Link to BLAST:NP_001358004.1
Original member Current member NCBI NM_001371077.1 NP_001358006.1 Accepted alive Link to Nucleotide Sequence:NM_001371077.1Link to Protein Sequence:NP_001358006.1Re-query CCDS DB by Nucleotide ID:NM_001371077Re-query CCDS DB by Protein ID:NP_001358006Link to BLAST:NP_001358006.1
Original member Current member NCBI NM_001371078.1 NP_001358007.1 Accepted alive Link to Nucleotide Sequence:NM_001371078.1Link to Protein Sequence:NP_001358007.1Re-query CCDS DB by Nucleotide ID:NM_001371078Re-query CCDS DB by Protein ID:NP_001358007Link to BLAST:NP_001358007.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000063.2 472 P16671-1 472 100% 0 0
NP_001001547.1 472 P16671-1 472 100% 0 0
NP_001001548.1 472 P16671-1 472 100% 0 0
NP_001120915.1 472 P16671-1 472 100% 0 0
NP_001120916.1 472 P16671-1 472 100% 0 0
NP_001358003.1 472 P16671-1 472 100% 0 0
NP_001358004.1 472 P16671-1 472 100% 0 0
NP_001358006.1 472 P16671-1 472 100% 0 0
NP_001358007.1 472 P16671-1 472 100% 0 0

Chromosomal Locations for CCDS 34673.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 80646741 80646860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80656540 80656700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80661063 80661210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80662990 80663169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80664406 80664497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80666443 80666489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80669953 80670022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80670977 80671164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80671922 80672040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80672770 80672843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80673355 80673409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80673983 80674147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGGGCTGTGACCGGAACTGTGGGCTCATCGCTGGGGCTGTCATTGGTGCTGTCCTGGCTGTGTTTGGAG
GTATTCTAATGCCAGTTGGAGACCTGCTTATCCAGAAGACAATTAAAAAGCAAGTTGTCCTCGAAGAAGG
TACAATTGCTTTTAAAAATTGGGTTAAAACAGGCACAGAAGTTTACAGACAGTTTTGGATCTTTGATGTG
CAAAATCCACAGGAAGTGATGATGAACAGCAGCAACATTCAAGTTAAGCAAAGAGGTCCTTATACGTACA
GAGTTCGTTTTCTAGCCAAGGAAAATGTAACCCAGGACGCTGAGGACAACACAGTCTCTTTCCTGCAGCC
CAATGGTGCCATCTTCGAACCTTCACTATCAGTTGGAACAGAGGCTGACAACTTCACAGTTCTCAATCTG
GCTGTGGCAGCTGCATCCCATATCTATCAAAATCAATTTGTTCAAATGATCCTCAATTCACTTATTAACA
AGTCAAAATCTTCTATGTTCCAAGTCAGAACTTTGAGAGAACTGTTATGGGGCTATAGGGATCCATTTTT
GAGTTTGGTTCCGTACCCTGTTACTACCACAGTTGGTCTGTTTTATCCTTACAACAATACTGCAGATGGA
GTTTATAAAGTTTTCAATGGAAAAGATAACATAAGTAAAGTTGCCATAATCGACACATATAAAGGTAAAA
GGAATCTGTCCTATTGGGAAAGTCACTGCGACATGATTAATGGTACAGATGCAGCCTCATTTCCACCTTT
TGTTGAGAAAAGCCAGGTATTGCAGTTCTTTTCTTCTGATATTTGCAGGTCAATCTATGCTGTATTTGAA
TCCGACGTTAATCTGAAAGGAATCCCTGTGTATAGATTTGTTCTTCCATCCAAGGCCTTTGCCTCTCCAG
TTGAAAACCCAGACAACTATTGTTTCTGCACAGAAAAAATTATCTCAAAAAATTGTACATCATATGGTGT
GCTAGACATCAGCAAATGCAAAGAAGGGAGACCTGTGTACATTTCACTTCCTCATTTTCTGTATGCAAGT
CCTGATGTTTCAGAACCTATTGATGGATTAAACCCAAATGAAGAAGAACATAGGACATACTTGGATATTG
AACCTATAACTGGATTCACTTTACAATTTGCAAAACGGCTGCAGGTCAACCTATTGGTCAAGCCATCAGA
AAAAATTCAAGTATTAAAGAATCTGAAGAGGAACTATATTGTGCCTATTCTTTGGCTTAATGAGACTGGG
ACCATTGGTGATGAGAAGGCAAACATGTTCAGAAGTCAAGTAACTGGAAAAATAAACCTCCTTGGCCTGA
TAGAAATGATCTTACTCAGTGTTGGTGTGGTGATGTTTGTTGCTTTTATGATTTCATATTGTGCATGCAG
ATCGAAAACAATAAAATAA

Translation (472 aa):
MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDV
QNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGTEADNFTVLNL
AVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLWGYRDPFLSLVPYPVTTTVGLFYPYNNTADG
VYKVFNGKDNISKVAIIDTYKGKRNLSYWESHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFE
SDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYAS
PDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH