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Report for CCDS47734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47734.1 Public Homo sapiens 7 FAM131B 24 110 108 CCDS HistoryNCBI Gene:9715Re-query CCDS DB by CCDS ID:47734.1Re-query CCDS DB by GeneID:9715See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47734.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443739.7 ENSP00000410603.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443739.7Link to Ensembl Protein Viewer:ENSP00000410603.2Re-query CCDS DB by Nucleotide ID:ENST00000443739Re-query CCDS DB by Protein ID:ENSP00000410603
Original member Current member NCBI NM_001031690.3 NP_001026860.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031690.3Link to Protein Sequence:NP_001026860.2Re-query CCDS DB by Nucleotide ID:NM_001031690Re-query CCDS DB by Protein ID:NP_001026860Link to BLAST:NP_001026860.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026860.2 360 Q86XD5-3 360 100% 0 0

Chromosomal Locations for CCDS 47734.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 143356550 143357022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143357280 143357423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143358827 143359024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143359326 143359419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143359732 143359767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143360040 143360149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143362576 143362603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGGGCTGCATCGGCTCCCGGACTGTGGGGAATGAGGTGATTGCAGTGGATTGGAAGGGCCTGAAGGATG
TCGATCAAATCAACATGGACAGCACCAGCTCACTGCACGGGAGCAGCCTCCATCGGCCATCGACTGAGCA
AACTCGAACTGATTTCTCCTGGGACGGCATCAACCTCTCCATGGAGGACACCACTTCCATTCTTCCGAAG
CTTAAGCGAAACTCTAACGCCTATGGCATTGGGGCCCTGGCCAAGTCATCATTCTCAGGGATCTCACGGA
GCATGAAGGACCATGTGACAAAGCCCACAGCCATGGGGCAAGGCCGGGTGGCCCACATGATTGAGTGGCA
GGGCTGGGGGAAGACACCAGCTGTTCAGCCACAACACAGCCATGAGTCCGTGCGCAGGGATACGGATGCC
TACTCCGACCTCAGCGATGGCGAGAAGGAGGCACGTTTTCTAGCAGGCGTCATGGAGCAGTTTGCTATCT
CTGAGGCCACACTCATGGCCTGGTCTTCCATGGATGGTGAGGACATGAGTGTGAACTCCACCCAGGAGCC
ATTGGGCTGCAACTACAGTGACAACTACCAGGAACTGATGGACAGTCAGGATGCCCTGGCTCAAGCACCC
ATGGATGGATGGCCTCACTCTTACGTGTCCCAGGGTATGTACTGTCTGGGGTCGTCAGATGCCTGGGAAG
CCAGCGATCAGTCCCTCATTGCCTCTCCGGCCACAGGATCCTATCTTGGGCCTGCATTTGATGACTCACA
ACCCAGCTTGCATGAAATGGGACCTTCCCAACCAGCTTCAGGATACTCTGCTCTGGAGCCTCCACCTTTG
CTGGGGGGAGACACTGACTGGGCTCCGGGGGTAGGCGCAGTGGACCTGGCAAGGGGCCCTGCTGAGGAGG
AGAAGAGGCCATTGGCACCTGAGGAGGAAGAGGATGCGGGATGCCGGGACCTGGAGTCACTTTCCCCACG
AGAAGACCCTGAGATGTCTACCGCTCTCAGCCGGAAGGTGTCTGACGTCACATCCTCAGGTGTGCAGTCC
TTTGATGAGGAGGAAGGCGAGGCCAACAACTAG

Translation (360 aa):
MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLSMEDTTSILPK
LKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDA
YSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQAP
MDGWPHSYVSQGMYCLGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPL
LGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQS
FDEEEGEANN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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