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Report for CCDS60958.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60958.1 Public Homo sapiens 11 SDHD 24 110 108 CCDS HistoryNCBI Gene:6392Re-query CCDS DB by CCDS ID:60958.1Re-query CCDS DB by GeneID:6392See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60958.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000526592.5 ENSP00000432005.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526592.5Link to Ensembl Protein Viewer:ENSP00000432005.1Re-query CCDS DB by Nucleotide ID:ENST00000526592Re-query CCDS DB by Protein ID:ENSP00000432005
Original member Current member NCBI NM_001276506.2 NP_001263435.1 Accepted alive Link to Nucleotide Sequence:NM_001276506.2Link to Protein Sequence:NP_001263435.1Re-query CCDS DB by Nucleotide ID:NM_001276506Re-query CCDS DB by Protein ID:NP_001263435Link to BLAST:NP_001263435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263435.1 143 O14521-4 143 100% 0 0

Chromosomal Locations for CCDS 60958.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 112086908 112086959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112087857 112087973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112088867 112089011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112093080 112093197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (432 nt):
ATGGCGGTTCTCTGGAGGCTGAGTGCCGTTTGCGGTGCCCTAGGAGGCCGAGCTCTGTTGCTTCGAACTC
CAGTGGTCAGACCTGCTCATATCTCAGCATTTCTTCAGGACCGACCTATCCCAGAATGGTGTGGAGTGCA
GCACATACACTTGTCACCGAGCCACCATTCTGGCTCCAAGGCTGCATCTCTCCACTGGACTAGCGAGAGG
GTTGTCAGTGTTTTGCTCCTGGGTCTGCTTCCGGCTGCTTATTTGAATCCTTGCTCTGCGATGGACTATT
CCCTGGCTGCAGCCCTCACTCTTCATGGTCACTGGCTGGAGTGCAATGGTGCGATCTTGGCTCGGCACGA
TCTCGGCTCAGCACGATCTCAGCTTACTGCAACCTCCGCCTTTCGGGTTCAAGCGATTCTCCTGCCTCAG
CCTCCCAAGTAG

Translation (143 aa):
MAVLWRLSAVCGALGGRALLLRTPVVRPAHISAFLQDRPIPEWCGVQHIHLSPSHHSGSKAASLHWTSER
VVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWLECNGAILARHDLGSARSQLTATSAFRVQAILLPQ
PPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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