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Report for CCDS73475.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73475.1 Public Homo sapiens 12 SP7 24 110 108 CCDS HistoryNCBI Gene:121340Re-query CCDS DB by CCDS ID:73475.1Re-query CCDS DB by GeneID:121340See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73475.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537210.2 ENSP00000441367.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537210.2Link to Ensembl Protein Viewer:ENSP00000441367.2Re-query CCDS DB by Nucleotide ID:ENST00000537210Re-query CCDS DB by Protein ID:ENSP00000441367
Original member Current member NCBI NM_001300837.2 NP_001287766.1 Accepted alive Link to Nucleotide Sequence:NM_001300837.2Link to Protein Sequence:NP_001287766.1Re-query CCDS DB by Nucleotide ID:NM_001300837Re-query CCDS DB by Protein ID:NP_001287766Link to BLAST:NP_001287766.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287766.1 413 Q8TDD2-2 413 100% 0 0

Chromosomal Locations for CCDS 73475.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 53328146 53329387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGCTGACGGCAGCGTGCAGCAAATTTGGTGGCTCTAGCCCTCTGCGGGACTCAACAACTCTGGGCAAAG
CAGGCACAAAGAAGCCGTACTCTGTGGGCAGTGACCTTTCAGCCTCCAAAACCATGGGGGATGCTTATCC
AGCCCCCTTTACAAGCACTAATGGGCTCCTTTCACCTGCAGGCAGTCCTCCAGCACCCACCTCAGGCTAT
GCTAATGATTACCCTCCCTTTTCCCACTCATTCCCTGGGCCCACAGGCACCCAGGACCCTGGGCTACTAG
TGCCCAAGGGGCACAGCTCTTCTGACTGTCTGCCCAGTGTCTACACCTCTCTGGACATGACACACCCCTA
TGGCTCCTGGTACAAGGCAGGCATCCATGCAGGCATTTCACCAGGCCCAGGCAACACTCCTACTCCATGG
TGGGATATGCACCCTGGAGGCAACTGGCTAGGTGGTGGGCAGGGCCAGGGTGATGGGCTGCAAGGGACAC
TGCCCACAGGTCCAGCTCAGCCTCCACTGAACCCCCAGCTGCCCACCTACCCATCTGACTTTGCTCCCCT
TAATCCAGCCCCCTACCCAGCTCCCCACCTCTTGCAACCAGGGCCCCAGCATGTCTTGCCCCAAGATGTC
TATAAACCCAAGGCAGTGGGAAATAGTGGGCAGCTAGAAGGGAGTGGTGGAGCCAAACCCCCACGGGGTG
CAAGCACTGGGGGTAGTGGTGGATATGGGGGCAGTGGGGCAGGGCGCTCCTCCTGCGACTGCCCTAATTG
CCAGGAGCTAGAGCGGCTGGGAGCAGCAGCGGCTGGGCTGCGGAAGAAGCCCATCCACAGCTGCCACATC
CCTGGCTGCGGCAAGGTGTATGGCAAGGCTTCGCACCTGAAGGCCCACTTGCGCTGGCACACAGGCGAGA
GGCCCTTCGTCTGCAACTGGCTCTTCTGCGGCAAGAGGTTCACTCGTTCGGATGAGCTGGAGCGTCATGT
GCGCACTCACACCCGGGAGAAGAAGTTCACCTGCCTGCTCTGCTCCAAGCGCTTTACCCGAAGCGACCAC
CTGAGCAAACACCAGCGCACCCATGGAGAACCAGGCCCGGGTCCCCCTCCCAGTGGCCCCAAGGAGCTGG
GGGAGGGCCGCAGCACGGGGGAAGAGGAGGCCAGTCAGACGCCCCGACCTTCTGCCTCGCCAGCAACCCC
AGAGAAAGCCCCTGGAGGCAGCCCTGAGCAGAGCAACTTGCTGGAGATCTGA

Translation (413 aa):
MLTAACSKFGGSSPLRDSTTLGKAGTKKPYSVGSDLSASKTMGDAYPAPFTSTNGLLSPAGSPPAPTSGY
ANDYPPFSHSFPGPTGTQDPGLLVPKGHSSSDCLPSVYTSLDMTHPYGSWYKAGIHAGISPGPGNTPTPW
WDMHPGGNWLGGGQGQGDGLQGTLPTGPAQPPLNPQLPTYPSDFAPLNPAPYPAPHLLQPGPQHVLPQDV
YKPKAVGNSGQLEGSGGAKPPRGASTGGSGGYGGSGAGRSSCDCPNCQELERLGAAAAGLRKKPIHSCHI
PGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCSKRFTRSDH
LSKHQRTHGEPGPGPPPSGPKELGEGRSTGEEEASQTPRPSASPATPEKAPGGSPEQSNLLEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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