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Report for CCDS58242.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58242.1 Public Homo sapiens 12 CD63 24 110 108 CCDS HistoryNCBI Gene:967Re-query CCDS DB by CCDS ID:58242.1Re-query CCDS DB by GeneID:967See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58242.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000546939.5 ENSP00000447356.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546939.5Link to Ensembl Protein Viewer:ENSP00000447356.1Re-query CCDS DB by Nucleotide ID:ENST00000546939Re-query CCDS DB by Protein ID:ENSP00000447356
Original member Current member EBI ENST00000550776.5 ENSP00000448091.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000550776.5Link to Ensembl Protein Viewer:ENSP00000448091.1Re-query CCDS DB by Nucleotide ID:ENST00000550776Re-query CCDS DB by Protein ID:ENSP00000448091
Original member Current member NCBI NM_001257400.2 NP_001244329.1 Accepted alive Link to Nucleotide Sequence:NM_001257400.2Link to Protein Sequence:NP_001244329.1Re-query CCDS DB by Nucleotide ID:NM_001257400Re-query CCDS DB by Protein ID:NP_001244329Link to BLAST:NP_001244329.1
Original member Current member NCBI NM_001257401.2 NP_001244330.1 Accepted alive Link to Nucleotide Sequence:NM_001257401.2Link to Protein Sequence:NP_001244330.1Re-query CCDS DB by Nucleotide ID:NM_001257401Re-query CCDS DB by Protein ID:NP_001244330Link to BLAST:NP_001244330.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244329.1 156 P08962-3 156 100% 0 0
NP_001244330.1 156 P08962-3 156 100% 0 0

Chromosomal Locations for CCDS 58242.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 55725561 55725626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55725813 55725896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55726121 55726261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55726700 55726795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55726890 55726964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55727151 55727159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGATCACGTTTGCCATCTTTCTGTCTCTTATCATGTTGGTGGAGGTGGCCGCAGCCATTGCTGGCTATG
TGTTTAGAGATAAGGTGATGTCAGAGTTTAATAACAACTTCCGGCAGCAGATGGAGAATTACCCGAAAAA
CAACCACACTGCTTCGATCCTGGACAGGATGCAGGCAGATTTTAAGTGCTGTGGGGCTGCTAACTACACA
GATTGGGAGAAAATCCCTTCCATGTCGAAGAACCGAGTCCCCGACTCCTGCTGCATTAATGTTACTGTGG
GCTGTGGGATTAATTTCAACGAGAAGGCGATCCATAAGGAGGGCTGTGTGGAGAAGATTGGGGGCTGGCT
GAGGAAAAATGTGCTGGTGGTAGCTGCAGCAGCCCTTGGAATTGCTTTTGTCGAGGTTTTGGGAATTGTC
TTTGCCTGCTGCCTCGTGAAGAGTATCAGAAGTGGCTACGAGGTGATGTAG

Translation (156 aa):
MITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEFNNNFRQQMENYPKNNHTASILDRMQADFKCCGAANYT
DWEKIPSMSKNRVPDSCCINVTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIV
FACCLVKSIRSGYEVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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