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Report for CCDS90877.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90877.1 Public Homo sapiens 1 C1QC 24 110 108 CCDS HistoryNCBI Gene:714Re-query CCDS DB by CCDS ID:90877.1Re-query CCDS DB by GeneID:714See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90877.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000695749.1 ENSP00000512142.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695749.1Link to Ensembl Protein Viewer:ENSP00000512142.1Re-query CCDS DB by Nucleotide ID:ENST00000695749Re-query CCDS DB by Protein ID:ENSP00000512142
Original member Current member EBI ENST00000695753.1 ENSP00000512146.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695753.1Link to Ensembl Protein Viewer:ENSP00000512146.1Re-query CCDS DB by Nucleotide ID:ENST00000695753Re-query CCDS DB by Protein ID:ENSP00000512146
Original member Current member NCBI NM_001347620.2 NP_001334549.1 Accepted alive Link to Nucleotide Sequence:NM_001347620.2Link to Protein Sequence:NP_001334549.1Re-query CCDS DB by Nucleotide ID:NM_001347620Re-query CCDS DB by Protein ID:NP_001334549Link to BLAST:NP_001334549.1

Chromosomal Locations for CCDS 90877.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 22647313 22647783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGGACCCCCTGGGATGCCAGGGGTGCCCGGCCCCATGGGCATCCCTGGAGAGCCAGGTGAGGAGGGCA
GATACAAGCAGAAATTCCAGTCAGTGTTCACGGTCACTCGGCAGACCCACCAGCCCCCTGCACCCAACAG
CCTGATCAGATTCAACGCGGTCCTCACCAACCCGCAGGGAGATTATGACACGAGCACTGGCAAGTTCACC
TGCAAAGTCCCCGGCCTCTACTACTTTGTCTACCACGCGTCGCATACAGCCAACCTGTGCGTGCTGCTGT
ACCGCAGCGGCGTCAAAGTGGTCACCTTCTGTGGCCACACGTCCAAAACCAATCAGGTCAACTCGGGCGG
TGTGCTGCTGAGGTTGCAGGTGGGCGAGGAGGTGTGGCTGGCTGTCAATGACTACTACGACATGGTGGGC
ATCCAGGGCTCTGACAGCGTCTTCTCCGGCTTCCTGCTCTTCCCCGACTAG

Translation (156 aa):
MGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFT
CKVPGLYYFVYHASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVG
IQGSDSVFSGFLLFPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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