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Report for CCDS91979.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91979.1 Public Homo sapiens 15 GOLGA8A 24 110 108 CCDS HistoryNCBI Gene:23015Re-query CCDS DB by CCDS ID:91979.1Re-query CCDS DB by GeneID:23015See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91979.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000699472.1 ENSP00000514395.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699472.1Link to Ensembl Protein Viewer:ENSP00000514395.1Re-query CCDS DB by Nucleotide ID:ENST00000699472Re-query CCDS DB by Protein ID:ENSP00000514395
Original member Current member NCBI NM_001368071.2 NP_001355000.1 Accepted alive Link to Nucleotide Sequence:NM_001368071.2Link to Protein Sequence:NP_001355000.1Re-query CCDS DB by Nucleotide ID:NM_001368071Re-query CCDS DB by Protein ID:NP_001355000Link to BLAST:NP_001355000.1
Original member Current member NCBI NM_001368072.2 NP_001355001.1 Accepted alive Link to Nucleotide Sequence:NM_001368072.2Link to Protein Sequence:NP_001355001.1Re-query CCDS DB by Nucleotide ID:NM_001368072Re-query CCDS DB by Protein ID:NP_001355001Link to BLAST:NP_001355001.1

Chromosomal Locations for CCDS 91979.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34381411 34381613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34381701 34381856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34381968 34382068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34382151 34382251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34382386 34382526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34382797 34383053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34383441 34383528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34383746 34383853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34383961 34384047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34385048 34385157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34385254 34385338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34385427 34385474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34385740 34385778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34386625 34386741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34387833 34387952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34389644 34389691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1809 nt):
ATGGCAGAAGAAACTGGACAGAGTAAATTAGCTGCAGCCAAGAAAAAGTTCAAAGAATATTGGCAGAGAA
ACCGCCCTGGTGTTCCAGCAGCAGCGAAGAGGAACACGAAAGCAAATGGCAGTAGCCCTGAGACGGCCGC
TTCTGGTGGTTGCCACTCATCTGAGGCTTCCTCCTCCGCCTCCTCCTCTCTGCATGCGCGTCAGAGCCCG
TGCCAAGAACAAGCAGCAGTCCTGAACTCGAGGTCCATAAAAATCAGTCGACTGAATGACACCATCAAAT
CTTTGAAACAACAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGAAAAGAAAGCAAACAATGAGAAACA
GAAAGCTGAAAGGGAGCTAGAGGGTCAAATCCAGAGATTGAACACAGAGAAAAAGAAACTAAATACGGAC
CTGTATCACATGAAACATTCTCTCAGATACTTTGAAGAAGAGTCCAAGGATCTGGCCGGCCGCCTGCAAC
GTTCATCGCAGCGTATAGGAGAGTTAGAGTGGTCTCTCTGTGCTGTCGCCGCCACACAGAAGAAGAAGCC
GGATGGGTTCTCGAGCCGCAGTAAAGCACTTCTCAAGCGGCAGTTAGAGCAGTCCATACGGGAGCAGATA
CTGCTGAAAGGACACGTGACACAGTTGAAGGAGTCGCTTAAAGAAGTCCAGCTGGAGAGAGATCAATATG
CTGAACAAATAAAAGGAGAGAGGGCCCAGTGGCAGCAGAGGATGAGGAAAATGTCGCAGGAGGTTTGCAC
ATTGAAGGAGGAGAAGAAGCATGATACGCATCGGGTAGAGGAGCTGGAGAGGAGCTTGTCCAGACTCAAA
AACCAGATGGCTGAGCCACTGCCCCCGGATGCCCCAGCAGTGTCCTCTGAGGTGGAGCTGCAAGACCTGA
GGAAGGAGCTGGAGAGAGTGGCAGGAGAGCTCCAGGCTCAGGTGGAAAACAATCAGTGCATCAGTCTCCT
GAACCGTGGGCAAAAGGAGAGGCTTCGCGAGCAGGAGGAGAGGCTTCAGGAGCAGCAGGAGAGGCTTCGG
GAACGGGAGAAGAGGCTTCAGCAGCTGGCCGAGCCACAGAGCGACTTGGAGGAGCTGCACGAGAACAAGA
GCGCACTGCAGTTGGAGCAGCAAGTAAAGGAGCTGCAGGAGAAGCTGGGCCAGGTGATGGAGACGCTCAC
CTCGGCCGAGAAGGAGCCAGAGGCAGCAGTCCCAGCCTCAGGGACTGGGGGCGAGTCTAGCGGCCTTATG
GACCTCCTGGAGGAGAAGGCGGACCTGAGGGAGCATGTGGAGAAACTGGAACTTGGATTCATCCAGTACC
GGAGAGAGAGATGCCATCAGAAAGTACATCGCCTTCTAACAGAGCCAGGGGACAGTGCCAAAGATGCGTC
ACCGGGAGGAGGCCATCATCAGGCTGGCCCAGGACAAGGAGGAGAGGAAGGTGAAGCTGCTGGAGCTGCA
GGAGATGGTGTTGCGGCTTGTGGCAGCTACAGCGAGGGGCACGGCAAATTCCTGGCCGCTGCCCGGAACC
CTGCTGCTGAACCCAGTCCAGGAGCCCCAGCCCCCCAGGAGCTCGGGGCTGCCGACAAGCATGGTGATCT
TTGTGAGGCGAGCCTCACCAACAGCGTGGAGCCTGCACAAGGAGAAGCCAGGGAGGGTTCTTCCCAGGAC
AACCCTACTGCACAGCCAGTCGTGCAGCTCCTTGGTGAGATGCAGGACCACCAGGAGCACCCAGGCTTGG
GCAGCAACTGCTGTGTGCCATGCTTTTGCTGGGCTTGGCTGCCGAGAAGAAGGAGATAA

Translation (602 aa):
MAEETGQSKLAAAKKKFKEYWQRNRPGVPAAAKRNTKANGSSPETAASGGCHSSEASSSASSSLHARQSP
CQEQAAVLNSRSIKISRLNDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEKKKLNTD
LYHMKHSLRYFEEESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQLEQSIREQI
LLKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHRVEELERSLSRLK
NQMAEPLPPDAPAVSSEVELQDLRKELERVAGELQAQVENNQCISLLNRGQKERLREQEERLQEQQERLR
EREKRLQQLAEPQSDLEELHENKSALQLEQQVKELQEKLGQVMETLTSAEKEPEAAVPASGTGGESSGLM
DLLEEKADLREHVEKLELGFIQYRRERCHQKVHRLLTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAA
GDGVAACGSYSEGHGKFLAAARNPAAEPSPGAPAPQELGAADKHGDLCEASLTNSVEPAQGEAREGSSQD
NPTAQPVVQLLGEMQDHQEHPGLGSNCCVPCFCWAWLPRRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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