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Report for CCDS6642.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6642.1 Public Homo sapiens 9 ZFAND5 24 110 108 CCDS HistoryNCBI Gene:7763Re-query CCDS DB by CCDS ID:6642.1Re-query CCDS DB by GeneID:7763See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6642.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000237937.7 ENSP00000237937.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000237937.7Link to Ensembl Protein Viewer:ENSP00000237937.3Re-query CCDS DB by Nucleotide ID:ENST00000237937Re-query CCDS DB by Protein ID:ENSP00000237937
Original member Current member EBI ENST00000343431.6 ENSP00000350586.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343431.6Link to Ensembl Protein Viewer:ENSP00000350586.2Re-query CCDS DB by Nucleotide ID:ENST00000343431Re-query CCDS DB by Protein ID:ENSP00000350586
Original member Current member EBI ENST00000376960.8 ENSP00000366159.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376960.8Link to Ensembl Protein Viewer:ENSP00000366159.4Re-query CCDS DB by Nucleotide ID:ENST00000376960Re-query CCDS DB by Protein ID:ENSP00000366159
Original member Current member EBI ENST00000376962.10 ENSP00000366161.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376962.10Link to Ensembl Protein Viewer:ENSP00000366161.5Re-query CCDS DB by Nucleotide ID:ENST00000376962Re-query CCDS DB by Protein ID:ENSP00000366161
Original member Current member NCBI NM_001102420.3 NP_001095890.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001102420.3Link to Protein Sequence:NP_001095890.1Re-query CCDS DB by Nucleotide ID:NM_001102420Re-query CCDS DB by Protein ID:NP_001095890Link to BLAST:NP_001095890.1
Original member Current member NCBI NM_001102421.3 NP_001095891.1 Accepted alive Link to Nucleotide Sequence:NM_001102421.3Link to Protein Sequence:NP_001095891.1Re-query CCDS DB by Nucleotide ID:NM_001102421Re-query CCDS DB by Protein ID:NP_001095891Link to BLAST:NP_001095891.1
Original member Current member NCBI NM_001278243.2 NP_001265172.1 Accepted alive Link to Nucleotide Sequence:NM_001278243.2Link to Protein Sequence:NP_001265172.1Re-query CCDS DB by Nucleotide ID:NM_001278243Re-query CCDS DB by Protein ID:NP_001265172Link to BLAST:NP_001265172.1
Original member Current member NCBI NM_001278244.1 NP_001265173.1 Accepted alive Link to Nucleotide Sequence:NM_001278244.1Link to Protein Sequence:NP_001265173.1Re-query CCDS DB by Nucleotide ID:NM_001278244Re-query CCDS DB by Protein ID:NP_001265173Link to BLAST:NP_001265173.1
Original member Current member NCBI NM_001278245.2 NP_001265174.1 Accepted alive Link to Nucleotide Sequence:NM_001278245.2Link to Protein Sequence:NP_001265174.1Re-query CCDS DB by Nucleotide ID:NM_001278245Re-query CCDS DB by Protein ID:NP_001265174Link to BLAST:NP_001265174.1
Original member Current member NCBI NM_006007.4 NP_005998.1 Accepted alive Link to Nucleotide Sequence:NM_006007.4Link to Protein Sequence:NP_005998.1Re-query CCDS DB by Nucleotide ID:NM_006007Re-query CCDS DB by Protein ID:NP_005998Link to BLAST:NP_005998.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001095890.1 213 O76080 213 100% 0 0
NP_001095891.1 213 O76080 213 100% 0 0
NP_001265172.1 213 O76080 213 100% 0 0
NP_001265173.1 213 O76080 213 100% 0 0
NP_001265174.1 213 O76080 213 100% 0 0
NP_005998.1 213 O76080 213 100% 0 0

Chromosomal Locations for CCDS 6642.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 72355953 72356101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72356931 72357056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72359418 72359521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72360110 72360221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72360628 72360778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGGCTCAGGAGACTAACCAGACCCCGGGGCCCATGCTGTGTAGCACAGGATGTGGCTTTTATGGAAATC
CTAGGACAAATGGAATGTGTTCAGTTTGCTACAAAGAACATCTTCAGAGGCAGCAAAATAGTGGCAGAAT
GAGCCCAATGGGAACAGCTAGTGGTTCCAACAGTCCTACCTCAGATTCTGCATCTGTACAGAGAGCAGAC
ACTAGCTTAAACAACTGTGAAGGTGCTGCTGGCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGGCTG
CCTTGCCTGTAACTCAGCAAATGACAGAAATGAGCATTTCAAGAGAGGACAAAATAACTACCCCGAAAAC
AGAGGTGTCAGAGCCAGTTGTCACTCAGCCCAGTCCATCAGTTTCTCAGCCCAGTACTTCTCAGAGTGAA
GAAAAAGCTCCTGAATTGCCCAAACCAAAGAAAAACAGATGTTTCATGTGCAGAAAGAAAGTTGGTCTTA
CAGGGTTTGACTGCCGATGTGGAAATTTGTTTTGTGGACTTCACCGTTACTCTGACAAGCACAACTGTCC
GTATGATTACAAAGCAGAAGCTGCAGCAAAAATCAGAAAAGAGAATCCAGTTGTTGTGGCTGAAAAAATT
CAGAGAATATAA

Translation (213 aa):
MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRAD
TSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSE
EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKI
QRI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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