NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32324.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32324.1 Public Homo sapiens 15 RLBP1 24 110 108 CCDS HistoryNCBI Gene:6017Re-query CCDS DB by CCDS ID:32324.1Re-query CCDS DB by GeneID:6017See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32324.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268125.10 ENSP00000268125.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268125.10Link to Ensembl Protein Viewer:ENSP00000268125.5Re-query CCDS DB by Nucleotide ID:ENST00000268125Re-query CCDS DB by Protein ID:ENSP00000268125
Original member Current member NCBI NM_000326.5 NP_000317.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000326.5Link to Protein Sequence:NP_000317.1Re-query CCDS DB by Nucleotide ID:NM_000326Re-query CCDS DB by Protein ID:NP_000317Link to BLAST:NP_000317.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000317.1 317 P12271 317 100% 0 0

Chromosomal Locations for CCDS 32324.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89210285 89210443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89210699 89210809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89211743 89211901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89215060 89215238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89217120 89217324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89218565 89218693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89218964 89218975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGTCAGAAGGGGTGGGCACGTTCCGCATGGTACCTGAAGAGGAACAGGAGCTCCGTGCCCAACTGGAGC
AGCTCACAACCAAGGACCATGGACCTGTCTTTGGCCCGTGCAGCCAGCTGCCCCGCCACACCTTGCAGAA
GGCCAAGGATGAGCTGAACGAGAGAGAGGAGACCCGGGAGGAGGCAGTGCGAGAGCTGCAGGAGATGGTG
CAGGCGCAGGCGGCCTCGGGGGAGGAGCTGGCGGTGGCCGTGGCGGAGAGGGTGCAAGAGAAGGACAGCG
GCTTCTTCCTGCGCTTCATCCGCGCACGGAAGTTCAACGTGGGCCGTGCCTATGAGCTGCTCAGAGGCTA
TGTGAATTTCCGGCTGCAGTACCCTGAGCTCTTTGACAGCCTGTCCCCAGAGGCTGTCCGCTGCACCATT
GAAGCTGGCTACCCTGGTGTCCTCTCTAGTCGGGACAAGTATGGCCGAGTGGTCATGCTCTTCAACATTG
AGAACTGGCAAAGTCAAGAAATCACCTTTGATGAGATCTTGCAGGCATATTGCTTCATCCTGGAGAAGCT
GCTGGAGAATGAGGAAACTCAAATCAATGGCTTCTGCATCATTGAGAACTTCAAGGGCTTTACCATGCAG
CAGGCTGCTAGTCTCCGGACTTCAGATCTCAGGAAGATGGTGGACATGCTCCAGGATTCCTTCCCAGCCC
GGTTCAAAGCCATCCACTTCATCCACCAGCCATGGTACTTCACCACGACCTACAATGTGGTCAAGCCCTT
CTTGAAGAGCAAGCTGCTTGAGAGGGTCTTTGTCCACGGGGATGACCTTTCTGGTTTCTACCAGGAGATC
GATGAGAACATCCTGCCCTCTGACTTCGGGGGCACGCTGCCCAAGTATGATGGCAAGGCCGTTGCTGAGC
AGCTCTTTGGCCCCCAGGCCCAAGCTGAGAACACAGCCTTCTGA

Translation (317 aa):
MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEREETREEAVRELQEMV
QAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTI
EAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQ
QAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEI
DENILPSDFGGTLPKYDGKAVAEQLFGPQAQAENTAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH