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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS53905.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
53905.1 |
Public |
Homo sapiens |
14 |
VIPAS39 |
24 |
110 |
108 |
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Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 53905.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000327028.8 |
ENSP00000313098.5 |
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Accepted |
alive |
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EBI |
ENST00000448935.6 |
ENSP00000404815.2 |
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Accepted |
alive |
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NCBI |
NM_001193316.2 |
NP_001180245.1 |
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Accepted |
alive |
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NCBI |
NM_001400324.1 |
NP_001387253.1 |
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Accepted |
alive |
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NCBI |
NM_001400325.1 |
NP_001387254.1 |
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Accepted |
alive |
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Chromosomal Locations for CCDS 53905.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1335 nt): ATGAATCGGACAAAGGGTGATGAGGAGGAGTATTGGAACAGCTCCAAGTTCAAGGCTTTTACCTTTGACG ATGAAGACGATGAGCTTTCACAGTTAAAGGAGTCCAAGCGGGCGGTGAACAGCCTCCGAGACTTCGTGGA TGATGATGACGATGATGACCTGGAGCGAGTCAGCTGGAGTGGGGAACCTGTGGGAAGTAGAACTAGACCT GGAAGTTTCCAGTCCCTTTCTGATGCTCTGTCAGACACACCTGCCAAAAGCTATGCTCCAGAGCTGGGGA GACCCAAAGGGGAGTATAGGGATTACAGCAATGACTGGAGCCCCAGTGATACAGTGCGACGTCTCCGGAA GGGCAAGGTTTGCTCACTAGAGAGATTCCGCTCCTTACAGGACAAACTACAACTCCTAGAAGAGGCAGTA AGCATGCATGATGGAAACGTCATTACTGCAGTTCTGATTTTCCTGAAGAGGACACTGAGCAAAGAGATCC TCTTCCGAGAGCTGGAGGTGCGACAGGTTGCCCTGAGACATCTTATTCACTTCCTTAAGGAAATAGGGGA TCAAAAGTTGCTTTTAGACCTCTTCAGGTTCCTAGATAGAACAGAAGAGCTTGCGCTATCTCATTATCGA GAGCATTTGAACATTCAGGACCCTGACAAACGAAAAGAATTTCTTAAAACCTGTGTTGGTTTGCCATTTT CAGCAGAAGATTCCGCACACATACAGGACCATTACACGCTCCTGGAACGTCAGATCATTATTGAGGCAAA TGATCGCCATCTAGAATCAGCAGGACAGACTGAGATCTTCCGAAAGCACCCCCGCAAAGCCTCCATCCTC AACATGCCACTAGTGACAACACTTTTCTACTCCTGCTTCTATCACTACACAGAGGCTGAGGGGACATTCA GCAGTCCCGTCAACCTGAAGAAGACATTTAAGATCCCAGATAAACAGTATGTGCTGACAGCCCTGGCTGC TCGTGCCAAGCTTCGAGCCTGGAATGATGTAGATGCCCTATTCACCACAAAGAACTGGCTGGGCTATACC AAGAAGAGAGCACCCATTGGCTTCCATCGGGTTGTCGAAATTTTGCACAAGAACAATGCCCCTGTGCAGA TATTACAGGAGTATGTCAATCTGGTGGAAGATGTGGACACGAAGTTGAACTTAGCCACTAAGTTCAAGTG CCATGATGTCGTCATTGATACCTACCGGGACCTGAAGGATCGTCAACAGTTGCTAGCATACAGGAGTAAG GTAGATAAAGGATCAGCAGAGGAGGAGAAGATTGATGCTCTTCTCAGCAGCTCGCAAATTCGATGGAAGA ATTAA
Translation (444 aa): MNRTKGDEEEYWNSSKFKAFTFDDEDDELSQLKESKRAVNSLRDFVDDDDDDDLERVSWSGEPVGSRTRP GSFQSLSDALSDTPAKSYAPELGRPKGEYRDYSNDWSPSDTVRRLRKGKVCSLERFRSLQDKLQLLEEAV SMHDGNVITAVLIFLKRTLSKEILFRELEVRQVALRHLIHFLKEIGDQKLLLDLFRFLDRTEELALSHYR EHLNIQDPDKRKEFLKTCVGLPFSAEDSAHIQDHYTLLERQIIIEANDRHLESAGQTEIFRKHPRKASIL NMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWNDVDALFTTKNWLGYT KKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTKLNLATKFKCHDVVIDTYRDLKDRQQLLAYRSK VDKGSAEEEKIDALLSSSQIRWKN
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